STRINGSTRING
Dde_0466 Dde_0466 Dde_0467 Dde_0467 Dde_0465 Dde_0465 Dde_0464 Dde_0464 Dde_0468 Dde_0468 Dde_0463 Dde_0463
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dde_0466Hypothetical protein. (137 aa)    
Predicted Functional Partners:
Dde_0467
PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP-binding; Pyruvate/ketoisovalerate oxidoreductase; KEGG: dba:Dbac_3081 indolepyruvate ferredoxin oxidoreductase.
       0.773
Dde_0465
Thioredoxin-disulfide reductase; KEGG: dsa:Desal_1363 FAD-dependent pyridine nucleotide-disulfide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulfide oxidoreductase; Pyridine nucleotide-disulfide oxidoreductase, NAD-binding region.
       0.648
Dde_0464
PFAM: Glutaredoxin; KEGG: dvl:Dvul_2555 glutaredoxin.
       0.563
Dde_0468
KEGG: dba:Dbac_3164 CoA-binding domain-containing protein.
       0.541
Dde_0463
KEGG: dsa:Desal_1361 TrmB family transcriptional regulator; PFAM: Cyclic nucleotide-binding; HTH transcriptional regulator, GntR; SMART: Cyclic nucleotide-binding.
       0.406
Your Current Organism:
Desulfovibrio alaskensis
NCBI taxonomy Id: 207559
Other names: D. alaskensis G20, Desulfovibrio alaskensis G20, Desulfovibrio alaskensis str. G20, Desulfovibrio alaskensis strain G20, Desulfovibrio desulfuricans subsp. desulfuricans str. G20
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.