STRINGSTRING
Dde_0467 Dde_0467 Dde_3237 Dde_3237 Dde_1792 Dde_1792 Dde_0045 Dde_0045 Dde_0468 Dde_0468 Dde_1110 Dde_1110 Dde_1257 Dde_1257 Dde_1638 Dde_1638 Dde_1793 Dde_1793 Dde_0044 Dde_0044 Dde_0466 Dde_0466
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Dde_0467PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP-binding; Pyruvate/ketoisovalerate oxidoreductase; KEGG: dba:Dbac_3081 indolepyruvate ferredoxin oxidoreductase. (832 aa)    
Predicted Functional Partners:
Dde_3237
SMART: Pyruvate-flavodoxin oxidoreductase, EKR domain; TIGRFAM: Pyruvate-flavodoxin oxidoreductase; KEGG: dvl:Dvul_0348 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; PFAM: Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal; Pyruvate-flavodoxin oxidoreductase, EKR domain; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; Thiamine pyrophosphate enzyme, C-terminal TPP-binding; Pyruvate/ketoisovalerate oxidoreductase; Belongs to the pyruvate:ferredoxin/flavodoxin oxidoreductase family.
  
 
 0.998
Dde_1792
TIGRFAM: 2-oxoacid:acceptor oxidoreductase, alpha subunit; KEGG: dvm:DvMF_0184 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; PFAM: Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal; Pyruvate/ketoisovalerate oxidoreductase.
  
 
 0.951
Dde_0045
2-oxoglutarate synthase; KEGG: dvl:Dvul_0046 thiamine pyrophosphate binding domain-containing protein; PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP-binding.
 
 
 0.878
Dde_0468
KEGG: dba:Dbac_3164 CoA-binding domain-containing protein.
 
 
 
 0.868
Dde_1110
TIGRFAM: Adenylylsulphate reductase, alpha subunit; KEGG: dvl:Dvul_2136 adenylylsulfate reductase subunit alpha.
  
 
 0.862
Dde_1257
TIGRFAM: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit; KEGG: dma:DMR_34280 fumarate reductase flavoprotein subunit; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal.
  
 
 0.862
Dde_1638
KEGG: dvl:Dvul_1222 2-oxoglutarate ferredoxin oxidoreductase subunit beta; PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP-binding.
  
 
 0.852
Dde_1793
TIGRFAM: 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate; KEGG: dvm:DvMF_0185 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit; PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP-binding.
  
 
 0.852
Dde_0044
2-oxoisovalerate oxidoreductase, beta subunit; KEGG: dvm:DvMF_2055 2-ketoisovalerate ferredoxin reductase; PFAM: Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal.
 
 
 0.797
Dde_0466
Hypothetical protein.
       0.773
Your Current Organism:
Desulfovibrio alaskensis
NCBI taxonomy Id: 207559
Other names: D. alaskensis G20, Desulfovibrio alaskensis G20, Desulfovibrio alaskensis str. G20, Desulfovibrio alaskensis strain G20, Desulfovibrio desulfuricans subsp. desulfuricans str. G20
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