STRINGSTRING
Dde_0488 Dde_0488 Dde_0487 Dde_0487 Dde_0489 Dde_0489 Dde_0490 Dde_0490 Dde_0491 Dde_0491 Dde_0492 Dde_0492 Dde_0493 Dde_0493 Dde_0494 Dde_0494 Dde_0495 Dde_0495 Dde_0496 Dde_0496
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dde_0488Hypothetical protein. (48 aa)    
Predicted Functional Partners:
Dde_0487
KEGG: dvu:DVU2006 hypothetical protein.
       0.544
Dde_0489
TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: dsa:Desal_0106 heavy metal translocating P-type ATPase; PFAM: ATPase, P-type, ATPase-associated region; Haloacid dehalogenase-like hydrolase.
       0.541
Dde_0490
KEGG: dsa:Desal_0105 hypothetical protein.
       0.541
Dde_0491
KEGG: dbr:Deba_0548 hypothetical protein.
       0.500
Dde_0492
KEGG: dsa:Desal_0107 hypothetical protein.
       0.500
Dde_0493
KEGG: dap:Dacet_2133 hypothetical protein.
       0.485
Dde_0494
KEGG: dbr:Deba_0551 hypothetical protein.
       0.485
Dde_0495
TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: dsa:Desal_0101 heavy metal translocating P-type ATPase; PFAM: ATPase, P-type, ATPase-associated region; Haloacid dehalogenase-like hydrolase.
       0.485
Dde_0496
FeoA family protein; PFAM: Ferrous iron transporter, FeoA subunit; KEGG: dsa:Desal_0100 FeoA family protein.
       0.485
Your Current Organism:
Desulfovibrio alaskensis
NCBI taxonomy Id: 207559
Other names: D. alaskensis G20, Desulfovibrio alaskensis G20, Desulfovibrio alaskensis str. G20, Desulfovibrio alaskensis strain G20, Desulfovibrio desulfuricans subsp. desulfuricans str. G20
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