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rnfE rnfE rnfD rnfD rnfG rnfG rnfA rnfA rnfB rnfB Dde_0581 Dde_0581 Dde_3266 Dde_3266 Dde_3211 Dde_3211 Dde_3237 Dde_3237 nth nth Dde_0587 Dde_0587
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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experimentally determined
Predicted Interactions
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gene co-occurrence
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textmining
co-expression
protein homology
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rnfENADH:quinone oxidoreductase subunit RnfE; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. (224 aa)    
Predicted Functional Partners:
rnfD
NADH:quinone oxidoreductase subunit RnfD; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.
 
 
 0.997
rnfG
NADH:quinone oxidoreductase subunit RnfG; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the RnfG family.
 
 
 0.997
rnfA
NADH:quinone oxidoreductase subunit RnfA; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.
 
 
0.990
rnfB
NADH:quinone oxidoreductase subunit RnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
 
 
 0.989
Dde_0581
NADH:quinone oxidoreductase subunit RnfC; PFAM: Soluble ligand binding domain; KEGG: dvl:Dvul_0522 electron transport complex protein RnfC.
 
 
 0.985
Dde_3266
PFAM: NADH:ubiquinone oxidoreductase, 51kDa subunit; Soluble ligand binding domain; KEGG: dsa:Desal_0481 respiratory-chain NADH dehydrogenase domain 51 kDa subunit.
 
 
 0.955
Dde_3211
KEGG: dvm:DvMF_0305 split soret cytochrome c precursor.
  
 
 0.922
Dde_3237
SMART: Pyruvate-flavodoxin oxidoreductase, EKR domain; TIGRFAM: Pyruvate-flavodoxin oxidoreductase; KEGG: dvl:Dvul_0348 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; PFAM: Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal; Pyruvate-flavodoxin oxidoreductase, EKR domain; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; Thiamine pyrophosphate enzyme, C-terminal TPP-binding; Pyruvate/ketoisovalerate oxidoreductase; Belongs to the pyruvate:ferredoxin/flavodoxin oxidoreductase family.
   
 
 0.902
nth
Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.
 
  
 0.898
Dde_0587
ApbE family lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family.
 
   
 0.886
Your Current Organism:
Desulfovibrio alaskensis
NCBI taxonomy Id: 207559
Other names: D. alaskensis G20, Desulfovibrio alaskensis G20, Desulfovibrio alaskensis str. G20, Desulfovibrio alaskensis strain G20, Desulfovibrio desulfuricans subsp. desulfuricans str. G20
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