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Dde_0637 Dde_0637 Dde_3658 Dde_3658 Dde_3659 Dde_3659 thiM thiM Dde_1216 Dde_1216 rsgA rsgA Dde_3520 Dde_3520 Dde_3656 Dde_3656 Dde_0635 Dde_0635 Dde_0636 Dde_0636 Dde_1180 Dde_1180
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Dde_0637KEGG: mxa:MXAN_4523 putative lipoprotein. (456 aa)    
Predicted Functional Partners:
Dde_3658
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: dsa:Desal_0502 binding-protein-dependent transport systems inner membrane component.
  
 
 0.968
Dde_3659
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: dsa:Desal_0501 binding-protein-dependent transport systems inner membrane component.
  
 
 0.943
thiM
Hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family.
     
 0.908
Dde_1216
KEGG: dsa:Desal_1742 alkaline phosphatase; PFAM: Alkaline phosphatase; SMART: Alkaline phosphatase; Belongs to the alkaline phosphatase family.
   
 
 0.905
rsgA
Ribosome biogenesis GTPase RsgA; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.
     
  0.900
Dde_3520
Molybdate-transporting ATPase; PFAM: ABC transporter-like; KEGG: dma:DMR_19520 putative molybdenum ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core.
  
 
 0.827
Dde_3656
Glycerol-3-phosphate-transporting ATPase; PFAM: ABC transporter-like; Transport-associated OB, type 2; KEGG: dsa:Desal_0504 ABC transporter; SMART: ATPase, AAA+ type, core; Belongs to the ABC transporter superfamily.
  
 
 0.827
Dde_0635
KEGG: das:Daes_2938 tripartite ATP-independent periplasmic transporter DctQ component.
       0.496
Dde_0636
KEGG: dsa:Desal_3245 TRAP dicarboxylate transporter DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit.
       0.496
Dde_1180
TIGRFAM: Phosphoenolpyruvate-protein phosphotransferase; Phosphotransferase system, phosphocarrier HPr protein; Dihydroxyacetone kinase, subunit phosphotransferase; KEGG: dvm:DvMF_2584 phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilising enzyme; Phosphotransferase system, PEP-utilising enzyme, N-terminal; PEP-utilising enzyme, mobile region; Phosphotransferase system, phosphocarrier HPr protein; Phosphotransferase system, fructose subfamily IIA component; Belongs to the PEP-utilizing enzyme family.
     
 0.445
Your Current Organism:
Desulfovibrio alaskensis
NCBI taxonomy Id: 207559
Other names: D. alaskensis G20, Desulfovibrio alaskensis G20, Desulfovibrio alaskensis str. G20, Desulfovibrio alaskensis strain G20, Desulfovibrio desulfuricans subsp. desulfuricans str. G20
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