STRINGSTRING
Dde_0693 Dde_0693 Dde_0692 Dde_0692 Dde_0694 Dde_0694 Dde_1542 Dde_1542 Dde_0868 Dde_0868 Dde_0695 Dde_0695 Dde_0696 Dde_0696
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Dde_0693Citrate transporter; PFAM: Divalent ion symporter; Regulator of K+ conductance, C-terminal; KEGG: dat:HRM2_22850 SLC13A transporter family protein (TrkA domain protein). (607 aa)    
Predicted Functional Partners:
Dde_0692
KEGG: sfu:Sfum_0648 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region.
       0.757
Dde_0694
KEGG: dal:Dalk_2251 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region.
       0.699
Dde_1542
KEGG: dvm:DvMF_0816 acetyl-CoA carboxylase; PFAM: Acetyl-CoA carboxylase, alpha subunit, conserved region.
     
 0.536
Dde_0868
PFAM: Cation/H+ exchanger; KEGG: noc:Noc_0521 sodium/hydrogen exchanger; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
 
  
 0.489
Dde_0695
KEGG: dal:Dalk_2250 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region.
       0.403
Dde_0696
KEGG: dvl:Dvul_2828 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region.
       0.403
Your Current Organism:
Desulfovibrio alaskensis
NCBI taxonomy Id: 207559
Other names: D. alaskensis G20, Desulfovibrio alaskensis G20, Desulfovibrio alaskensis str. G20, Desulfovibrio alaskensis strain G20, Desulfovibrio desulfuricans subsp. desulfuricans str. G20
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