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msrA msrA msrB-2 msrB-2 msrB msrB polA polA Dde_2114 Dde_2114 Dde_2781 Dde_2781 Dde_2778 Dde_2778 Dde_1301 Dde_1301 Dde_2782 Dde_2782 Dde_2739 Dde_2739 Dde_3766 Dde_3766
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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[Homology]
Score
msrAPeptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. (167 aa)    
Predicted Functional Partners:
msrB-2
Peptide methionine sulfoxide reductase msrB; PFAM: Methionine sulphoxide reductase B; TIGRFAM: Methionine sulphoxide reductase B; HAMAP: Peptide methionine sulfoxide reductase msrB; KEGG: bph:Bphy_7199 methionine-R-sulfoxide reductase.
 
 0.997
msrB
TIGRFAM: Methionine sulphoxide reductase B; KEGG: dal:Dalk_4702 methionine-R-sulfoxide reductase; PFAM: Methionine sulphoxide reductase B.
 
 0.988
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
  
 0.769
Dde_2114
PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: dvm:DvMF_0475 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen.
   
 0.750
Dde_2781
Thioredoxin domain-containing protein; PFAM: Thioredoxin domain; KEGG: das:Daes_0507 thioredoxin domain-containing protein.
   
 0.750
Dde_2778
TIGRFAM: Redox-active disulfide protein 2; KEGG: dsa:Desal_2205 redox-active disulfide protein 2.
   
 0.746
Dde_1301
Protein-disulfide reductase; KEGG: dvm:DvMF_3036 cytochrome c biogenesis protein transmembrane region; PFAM: Cytochrome c assembly protein, transmembrane region.
   
 
 0.657
Dde_2782
PFAM: Cytochrome c assembly protein, transmembrane region; KEGG: dba:Dbac_1909 cytochrome c biogenesis protein transmembrane region.
   
 
 0.657
Dde_2739
PFAM: Glutaredoxin; KEGG: dvm:DvMF_2933 glutaredoxin.
  
 
 0.632
Dde_3766
Glutaredoxin; KEGG: dsa:Desal_0889 glutaredoxin.
  
 
 0.632
Your Current Organism:
Desulfovibrio alaskensis
NCBI taxonomy Id: 207559
Other names: D. alaskensis G20, Desulfovibrio alaskensis G20, Desulfovibrio alaskensis str. G20, Desulfovibrio alaskensis strain G20, Desulfovibrio desulfuricans subsp. desulfuricans str. G20
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