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msrB-2 msrB-2 msrA msrA msrA-2 msrA-2 Dde_1301 Dde_1301 Dde_2782 Dde_2782 rplT rplT msrB msrB rplK rplK rpmG rpmG rpmJ rpmJ rpsI rpsI
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
msrB-2Peptide methionine sulfoxide reductase msrB; PFAM: Methionine sulphoxide reductase B; TIGRFAM: Methionine sulphoxide reductase B; HAMAP: Peptide methionine sulfoxide reductase msrB; KEGG: bph:Bphy_7199 methionine-R-sulfoxide reductase. (149 aa)    
Predicted Functional Partners:
msrA
Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
 
 0.997
msrA-2
Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
 
 0.990
Dde_1301
Protein-disulfide reductase; KEGG: dvm:DvMF_3036 cytochrome c biogenesis protein transmembrane region; PFAM: Cytochrome c assembly protein, transmembrane region.
   
 
 0.718
Dde_2782
PFAM: Cytochrome c assembly protein, transmembrane region; KEGG: dba:Dbac_1909 cytochrome c biogenesis protein transmembrane region.
   
 
 0.718
rplT
Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
   
 
 0.640
msrB
TIGRFAM: Methionine sulphoxide reductase B; KEGG: dal:Dalk_4702 methionine-R-sulfoxide reductase; PFAM: Methionine sulphoxide reductase B.
 
 
0.607
rplK
Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.
    
 
 0.587
rpmG
TIGRFAM: Ribosomal protein L33; HAMAP: Ribosomal protein L33; KEGG: dvl:Dvul_0446 50S ribosomal protein L33; PFAM: Ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.
    
 
 0.585
rpmJ
KEGG: dsa:Desal_1207 50S ribosomal protein L36; TIGRFAM: Ribosomal protein L36; PFAM: Ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family.
    
 
 0.583
rpsI
PFAM: Ribosomal protein S9; KEGG: dvm:DvMF_0970 30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
   
   0.583
Your Current Organism:
Desulfovibrio alaskensis
NCBI taxonomy Id: 207559
Other names: D. alaskensis G20, Desulfovibrio alaskensis G20, Desulfovibrio alaskensis str. G20, Desulfovibrio alaskensis strain G20, Desulfovibrio desulfuricans subsp. desulfuricans str. G20
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