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glcB glcB Dde_3241 Dde_3241 Dde_2317 Dde_2317 Dde_2823 Dde_2823 acsA acsA fumC fumC Dde_1681 Dde_1681 Dde_1085 Dde_1085 Dde_3240 Dde_3240 Dde_1253 Dde_1253 Dde_3637 Dde_3637
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query proteins and first shell of interactors
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second shell of interactors
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experimentally determined
Predicted Interactions
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gene co-occurrence
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textmining
co-expression
protein homology
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glcBMalate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily. (728 aa)    
Predicted Functional Partners:
Dde_3241
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
 
 
 0.978
Dde_2317
Butyrate--CoA ligase; KEGG: dvl:Dvul_0993 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase.
   
 0.958
Dde_2823
TIGRFAM: Acetate--CoA ligase; KEGG: dvm:DvMF_2783 acetate/CoA ligase; PFAM: AMP-dependent synthetase/ligase.
   
 0.958
acsA
acetate/CoA ligase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.
   
 0.958
fumC
Fumarate hydratase class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
    
 0.937
Dde_1681
Phosphoglycerate dehydrogenase; KEGG: dvl:Dvul_1662 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region.
  
 
 0.924
Dde_1085
PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; Cysteine-rich region, CCG; KEGG: dvm:DvMF_2874 4Fe-4S ferredoxin iron-sulfur binding domain protein.
  
 
 0.921
Dde_3240
Protein of unknown function DUF224 cysteine-rich region domain protein; PFAM: Cysteine-rich region, CCG; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: dvl:Dvul_0345 hypothetical protein.
  
 
 0.921
Dde_1253
PFAM: Malic enzyme, NAD-binding; Malic enzyme, N-terminal; KEGG: dsa:Desal_0725 malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)).
  
 
 0.918
Dde_3637
PFAM: Malic enzyme, NAD-binding; Malic enzyme, N-terminal; KEGG: drt:Dret_0778 malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)).
  
 
 0.918
Your Current Organism:
Desulfovibrio alaskensis
NCBI taxonomy Id: 207559
Other names: D. alaskensis G20, Desulfovibrio alaskensis G20, Desulfovibrio alaskensis str. G20, Desulfovibrio alaskensis strain G20, Desulfovibrio desulfuricans subsp. desulfuricans str. G20
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