STRINGSTRING
Dde_1210 Dde_1210 Dde_1208 Dde_1208 Dde_1209 Dde_1209 Dde_3526 Dde_3526 Dde_1207 Dde_1207 Dde_1211 Dde_1211 Dde_3525 Dde_3525 Dde_3524 Dde_3524 Dde_1111 Dde_1111 Dde_3528 Dde_3528 Dde_1213 Dde_1213
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Dde_1210PFAM: Methyl-viologen-reducing hydrogenase, delta subunit; KEGG: dba:Dbac_0851 methyl-viologen-reducing hydrogenase delta subunit. (169 aa)    
Predicted Functional Partners:
Dde_1208
KEGG: dba:Dbac_0849 CoB--CoM heterodisulfide reductase; PFAM: Cysteine-rich region, CCG.
 
 0.999
Dde_1209
PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; KEGG: drt:Dret_0196 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
 0.999
Dde_3526
PFAM: FAD dependent oxidoreductase; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: dvl:Dvul_0828 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
 0.999
Dde_1207
KEGG: dsa:Desal_0602 heterodisulfide reductase, C subunit.
 
 0.997
Dde_1211
PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; Coenzyme F420 hydrogenase/dehydrogenase beta subunit, C-terminal; KEGG: drt:Dret_2313 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
 
  0.996
Dde_3525
KEGG: dsa:Desal_0601 CoB--CoM heterodisulfide reductase; PFAM: Cysteine-rich region, CCG.
 
 0.996
Dde_3524
KEGG: dsa:Desal_0602 heterodisulfide reductase, C subunit.
 
 0.992
Dde_1111
Quinone-interacting membrane-bound oxidoreductase; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; KEGG: dvl:Dvul_2135 FAD-dependent pyridine nucleotide-disulfide oxidoreductase.
 
 0.989
Dde_3528
PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: drt:Dret_2313 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
 
  0.981
Dde_1213
Sulfhydrogenase subunit gamma (sulfur reductase); PFAM: Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain; Oxidoreductase FAD-binding region; Oxidoreductase FAD/NAD(P)-binding; KEGG: dsa:Desal_0596 oxidoreductase FAD/NAD(P)-binding domain protein.
 
 
 0.974
Your Current Organism:
Desulfovibrio alaskensis
NCBI taxonomy Id: 207559
Other names: D. alaskensis G20, Desulfovibrio alaskensis G20, Desulfovibrio alaskensis str. G20, Desulfovibrio alaskensis strain G20, Desulfovibrio desulfuricans subsp. desulfuricans str. G20
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