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Dde_1260 Dde_1260 Dde_1261 Dde_1261 Dde_1771 Dde_1771 Dde_1700 Dde_1700 Dde_1697 Dde_1697 Dde_0382 Dde_0382 Dde_1800 Dde_1800 flhA flhA Dde_0352 Dde_0352 Dde_0381 Dde_0381 Dde_1015 Dde_1015
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Dde_1260Putative two component, sigma54 specific, transcriptional regulator; KEGG: gbm:Gbem_0673 sigma-54-dependent transcriptional response regulator; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; ATPase, AAA+ type, core. (473 aa)    
Predicted Functional Partners:
Dde_1261
KEGG: gur:Gura_2707 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region, ATPase-like; Cache, type 2; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region.
   
 
 0.867
Dde_1771
RNA polymerase, sigma 54 subunit, RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
   
 0.748
Dde_1700
Hpt protein; KEGG: dvm:DvMF_0237 putative CheA signal transduction histidine kinase; PFAM: Signal transduction histidine kinase, phosphotransfer (Hpt) region; SMART: Signal transduction histidine kinase, phosphotransfer (Hpt) region.
  
 
 0.526
Dde_1697
Multi-sensor hybrid histidine kinase; KEGG: dma:DMR_25470 two-component hybrid sensor and regulator; PFAM: ATP-binding region, ATPase-like; Signal transduction response regulator, receiver region; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction histidine kinase, phosphotransfer (Hpt) region; SMART: ATP-binding region, ATPase-like; Signal transduction response regulator, receiver region; Signal transduction histidine kinase, phosphotransfer (Hpt) region; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoaccep [...]
  
 
 0.504
Dde_0382
PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: dvm:DvMF_2012 cobyrinic acid ac-diamide synthase.
  
 
 0.490
Dde_1800
KEGG: dvl:Dvul_1300 flagellar synthesis regulator FleN.
  
 
 0.490
flhA
Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.
  
  
 0.489
Dde_0352
KEGG: dvm:DvMF_2288 flagellar motor switch protein FliG; TIGRFAM: Flagellar motor switch protein FliG; PFAM: Flagellar motor switch protein FliG; Magnesium transporter, MgtE intracellular region.
  
  
 0.485
Dde_0381
PFAM: Signal recognition particle, SRP54 subunit, GTPase; KEGG: dvm:DvMF_2013 flagellar biosynthesis protein FlhF, putative.
  
  
 0.483
Dde_1015
Histidine kinase; KEGG: met:M446_5170 PAS/PAC sensor hybrid histidine kinase; PFAM: ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region.
 
 
 0.477
Your Current Organism:
Desulfovibrio alaskensis
NCBI taxonomy Id: 207559
Other names: D. alaskensis G20, Desulfovibrio alaskensis G20, Desulfovibrio alaskensis str. G20, Desulfovibrio alaskensis strain G20, Desulfovibrio desulfuricans subsp. desulfuricans str. G20
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