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Dde_1265 Dde_1265 Dde_1266 Dde_1266 Dde_1267 Dde_1267 Dde_1268 Dde_1268 nnrE nnrE Dde_1269 Dde_1269 Dde_1264 Dde_1264
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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[Homology]
Score
Dde_1265KEGG: ssm:Spirs_2718 endoribonuclease L-PSP; TIGRFAM: YjgF-like protein; PFAM: Endoribonuclease L-PSP. (124 aa)    
Predicted Functional Partners:
Dde_1266
TIGRFAM: Diaminopropionate ammonia-lyase; Diaminopropionate ammonia-lyase, subgroup; KEGG: ctc:CTC00071 diaminopropionate ammonia-lyase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit.
  
 
 0.811
Dde_1267
PFAM: Peptidase M20; Peptidase M20, dimerisation; KEGG: drm:Dred_0260 peptidase.
       0.734
Dde_1268
PFAM: Sodium/solute symporter; KEGG: vpr:Vpar_1797 SSS sodium solute transporter superfamily; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
    0.704
nnrE
YjeF-related protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epi [...]
  
  
 0.493
Dde_1269
KEGG: drm:Dred_0263 N-acyl-D-amino-acid deacylase; PFAM: D-aminoacylase, C-terminal; Amidohydrolase 3.
     
 0.452
Dde_1264
PAS modulated sigma54 specific transcriptional regulator, Fis family; KEGG: cbf:CLI_2945 sigma-54 dependent transcriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; Helix-turn-helix, Fis-type; SMART: ATPase, AAA+ type, core; PAS.
       0.406
Your Current Organism:
Desulfovibrio alaskensis
NCBI taxonomy Id: 207559
Other names: D. alaskensis G20, Desulfovibrio alaskensis G20, Desulfovibrio alaskensis str. G20, Desulfovibrio alaskensis strain G20, Desulfovibrio desulfuricans subsp. desulfuricans str. G20
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