node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Dde_0653 | Dde_1997 | Dde_0653 | Dde_1997 | PFAM: Cytochrome c, class III; KEGG: dvl:Dvul_2405 cytochrome c class III. | Ribosomal RNA small subunit methyltransferase E; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | 0.516 |
Dde_0653 | prmA | Dde_0653 | Dde_1432 | PFAM: Cytochrome c, class III; KEGG: dvl:Dvul_2405 cytochrome c class III. | Ribosomal L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family. | 0.624 |
Dde_0653 | rplK | Dde_0653 | Dde_2992 | PFAM: Cytochrome c, class III; KEGG: dvl:Dvul_2405 cytochrome c class III. | Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.754 |
Dde_1302 | Dde_1997 | Dde_1302 | Dde_1997 | KEGG: dvm:DvMF_3042 heat shock protein DnaJ domain protein; PFAM: Heat shock protein DnaJ, N-terminal; SMART: Heat shock protein DnaJ, N-terminal. | Ribosomal RNA small subunit methyltransferase E; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | 0.516 |
Dde_1302 | prmA | Dde_1302 | Dde_1432 | KEGG: dvm:DvMF_3042 heat shock protein DnaJ domain protein; PFAM: Heat shock protein DnaJ, N-terminal; SMART: Heat shock protein DnaJ, N-terminal. | Ribosomal L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family. | 0.667 |
Dde_1302 | rplK | Dde_1302 | Dde_2992 | KEGG: dvm:DvMF_3042 heat shock protein DnaJ domain protein; PFAM: Heat shock protein DnaJ, N-terminal; SMART: Heat shock protein DnaJ, N-terminal. | Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.754 |
Dde_1430 | Dde_1431 | Dde_1430 | Dde_1431 | KEGG: dvm:DvMF_3153 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: Binding-protein-dependent transport systems inner membrane component. | KEGG: dvl:Dvul_0919 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: Binding-protein-dependent transport systems inner membrane component. | 0.986 |
Dde_1430 | prmA | Dde_1430 | Dde_1432 | KEGG: dvm:DvMF_3153 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: Binding-protein-dependent transport systems inner membrane component. | Ribosomal L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family. | 0.793 |
Dde_1431 | Dde_1430 | Dde_1431 | Dde_1430 | KEGG: dvl:Dvul_0919 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: Binding-protein-dependent transport systems inner membrane component. | KEGG: dvm:DvMF_3153 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: Binding-protein-dependent transport systems inner membrane component. | 0.986 |
Dde_1431 | prmA | Dde_1431 | Dde_1432 | KEGG: dvl:Dvul_0919 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: Binding-protein-dependent transport systems inner membrane component. | Ribosomal L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family. | 0.803 |
Dde_1659 | Dde_1997 | Dde_1659 | Dde_1997 | KEGG: dvm:DvMF_0569 chaperone DnaJ domain protein; PFAM: Chaperone DnaJ, C-terminal; Heat shock protein DnaJ, N-terminal; SMART: Heat shock protein DnaJ, N-terminal. | Ribosomal RNA small subunit methyltransferase E; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | 0.516 |
Dde_1659 | prmA | Dde_1659 | Dde_1432 | KEGG: dvm:DvMF_0569 chaperone DnaJ domain protein; PFAM: Chaperone DnaJ, C-terminal; Heat shock protein DnaJ, N-terminal; SMART: Heat shock protein DnaJ, N-terminal. | Ribosomal L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family. | 0.624 |
Dde_1659 | rplK | Dde_1659 | Dde_2992 | KEGG: dvm:DvMF_0569 chaperone DnaJ domain protein; PFAM: Chaperone DnaJ, C-terminal; Heat shock protein DnaJ, N-terminal; SMART: Heat shock protein DnaJ, N-terminal. | Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.754 |
Dde_1997 | Dde_0653 | Dde_1997 | Dde_0653 | Ribosomal RNA small subunit methyltransferase E; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | PFAM: Cytochrome c, class III; KEGG: dvl:Dvul_2405 cytochrome c class III. | 0.516 |
Dde_1997 | Dde_1302 | Dde_1997 | Dde_1302 | Ribosomal RNA small subunit methyltransferase E; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | KEGG: dvm:DvMF_3042 heat shock protein DnaJ domain protein; PFAM: Heat shock protein DnaJ, N-terminal; SMART: Heat shock protein DnaJ, N-terminal. | 0.516 |
Dde_1997 | Dde_1659 | Dde_1997 | Dde_1659 | Ribosomal RNA small subunit methyltransferase E; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | KEGG: dvm:DvMF_0569 chaperone DnaJ domain protein; PFAM: Chaperone DnaJ, C-terminal; Heat shock protein DnaJ, N-terminal; SMART: Heat shock protein DnaJ, N-terminal. | 0.516 |
Dde_1997 | Dde_3182 | Dde_1997 | Dde_3182 | Ribosomal RNA small subunit methyltransferase E; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | PFAM: Cytochrome c, class III; KEGG: dvl:Dvul_0215 cytochrome c class III. | 0.476 |
Dde_1997 | dnaJ | Dde_1997 | Dde_0248 | Ribosomal RNA small subunit methyltransferase E; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | 0.523 |
Dde_1997 | prmA | Dde_1997 | Dde_1432 | Ribosomal RNA small subunit methyltransferase E; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | Ribosomal L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family. | 0.725 |
Dde_3182 | Dde_1997 | Dde_3182 | Dde_1997 | PFAM: Cytochrome c, class III; KEGG: dvl:Dvul_0215 cytochrome c class III. | Ribosomal RNA small subunit methyltransferase E; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | 0.476 |