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Dde_1616 Dde_1616 Dde_1615 Dde_1615 Dde_1514 Dde_1514 Dde_1617 Dde_1617 Dde_1969 Dde_1969 Dde_1614 Dde_1614 Dde_4025 Dde_4025 Dde_3382 Dde_3382 Dde_3391 Dde_3391 Dde_3065 Dde_3065 Dde_1838 Dde_1838
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Experiments
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Textmining
[Homology]
Score
Dde_1616KEGG: dvl:Dvul_0509 metallo-beta-lactamase family protein. (385 aa)    
Predicted Functional Partners:
Dde_1615
KEGG: dvl:Dvul_0510 amino acid transporter, AAT family.
 
     0.940
Dde_1514
Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.
     
 0.913
Dde_1617
PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like; KEGG: dvu:DVU2805 P47K family cobalamin synthesis protein.
 
     0.904
Dde_1969
KEGG: dvl:Dvul_1430 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; TIGRFAM: 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK; PFAM: 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK.
     
  0.900
Dde_1614
KEGG: dvl:Dvul_0512 regulatory protein GntR, HTH; PFAM: HTH transcriptional regulator, GntR; GntR, C-terminal; SMART: HTH transcriptional regulator, GntR.
 
     0.785
Dde_4025
KEGG: dvl:Dvul_0511 hypothetical protein.
       0.705
Dde_3382
KEGG: gem:GM21_3662 hypothetical protein.
  
     0.628
Dde_3391
PFAM: Baseplate assembly protein J-like, predicted; KEGG: dvm:DvMF_1303 baseplate assembly protein, putative.
  
     0.581
Dde_3065
KEGG: dvm:DvMF_2682 membrane-bound lytic murein transglycosylase B-like protein.
  
     0.519
Dde_1838
KEGG: dvm:DvMF_0505 hypothetical protein.
  
     0.513
Your Current Organism:
Desulfovibrio alaskensis
NCBI taxonomy Id: 207559
Other names: D. alaskensis G20, Desulfovibrio alaskensis G20, Desulfovibrio alaskensis str. G20, Desulfovibrio alaskensis strain G20, Desulfovibrio desulfuricans subsp. desulfuricans str. G20
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