STRINGSTRING
Dde_2012 Dde_2012 Dde_0236 Dde_0236 Dde_3237 Dde_3237 acpP acpP Dde_2659 Dde_2659 Dde_0444 Dde_0444 Dde_1699 Dde_1699 Dde_0557 Dde_0557 Dde_0043 Dde_0043 Dde_0265 Dde_0265 Dde_0475 Dde_0475
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Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Dde_2012KEGG: bja:bll4284 acetyl hydrolace. (325 aa)    
Predicted Functional Partners:
Dde_0236
KEGG: dvl:Dvul_2879 NAD-dependent epimerase/dehydratase.
  
 
 0.838
Dde_3237
SMART: Pyruvate-flavodoxin oxidoreductase, EKR domain; TIGRFAM: Pyruvate-flavodoxin oxidoreductase; KEGG: dvl:Dvul_0348 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; PFAM: Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal; Pyruvate-flavodoxin oxidoreductase, EKR domain; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; Thiamine pyrophosphate enzyme, C-terminal TPP-binding; Pyruvate/ketoisovalerate oxidoreductase; Belongs to the pyruvate:ferredoxin/flavodoxin oxidoreductase family.
  
   0.807
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
   
 
 0.803
Dde_2659
PFAM: Phosphopantetheine-binding; KEGG: dvl:Dvul_0686 acyl carrier protein.
   
 
 0.803
Dde_0444
PFAM: Peptidase M16, N-terminal; Peptidase M16, C-terminal; KEGG: dvu:DVU2379 M16 family peptidase putative; Belongs to the peptidase M16 family.
    
 
 0.755
Dde_1699
KEGG: dvl:Dvul_1646 peptidase M16 domain-containing protein; PFAM: Peptidase M16, N-terminal; Peptidase M16, C-terminal; Belongs to the peptidase M16 family.
    
 
 0.755
Dde_0557
Long-chain-fatty-acid--CoA ligase; KEGG: dvl:Dvul_0312 AMP-binding domain protein; PFAM: AMP-dependent synthetase/ligase.
 
 
 0.706
Dde_0043
Ferrodoxin-like protein; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: dsa:Desal_3826 4Fe-4S ferredoxin iron-sulfur binding domain protein.
   
   0.701
Dde_0265
PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: dpr:Despr_1763 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein.
   
   0.701
Dde_0475
Fe-only hydrogenase, large & small subunits, cytoplasmic; SMART: Iron hydrogenase, small subunit-like; TIGRFAM: Iron hydrogenase, subset; KEGG: dps:DP0479 Fe-center hydrogenase, large subunit; PFAM: Iron hydrogenase, large subunit, C-terminal; Iron hydrogenase, small subunit-like; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup.
   
   0.701
Your Current Organism:
Desulfovibrio alaskensis
NCBI taxonomy Id: 207559
Other names: D. alaskensis G20, Desulfovibrio alaskensis G20, Desulfovibrio alaskensis str. G20, Desulfovibrio alaskensis strain G20, Desulfovibrio desulfuricans subsp. desulfuricans str. G20
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