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tsaD tsaD Dde_1121 Dde_1121 Dde_2047 Dde_2047 rsmA rsmA Dde_2289 Dde_2289 Dde_2063 Dde_2063 polA polA Dde_2070 Dde_2070 fbp fbp pheT pheT pheS pheS
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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tsaDMetalloendopeptidase, glycoprotease family; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. (367 aa)    
Predicted Functional Partners:
Dde_1121
PFAM: Peptidase M22, glycoprotease; KEGG: dvm:DvMF_2913 peptidase M22 glycoprotease.
  
 
 0.961
Dde_2047
Uncharacterized protein family UPF0079, ATPase; KEGG: dvm:DvMF_0277 protein of unknown function UPF0079; TIGRFAM: Uncharacterized protein family UPF0079, ATPase bacteria; PFAM: Uncharacterized protein family UPF0079, ATPase bacteria.
  
 
 0.934
rsmA
Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.
 
  
 0.787
Dde_2289
KEGG: dvm:DvMF_0844 SUA5/YciO/YrdC/YwlC family protein; TIGRFAM: Sua5/YciO/YrdC/YwlC; PFAM: Sua5/YciO/YrdC, N-terminal; Belongs to the SUA5 family.
  
 
 0.741
Dde_2063
TIGRFAM: Translation elongation factor EFG/EF2; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFG/EF2, domain IV; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, C-terminal; KEGG: dvu:DVU1799 elongation factor G; SMART: Translation elongation factor EFG/EF2, domain IV; Translation elongation factor EFG/EF2, C-terminal.
 
 
 0.649
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
 
   
 0.639
Dde_2070
Sporulation domain-containing protein; PFAM: Sporulation/cell division region, bacteria; KEGG: dvm:DvMF_0405 hypothetical protein.
   
 
 0.636
fbp
Fructose-bisphosphatase; KEGG: dvl:Dvul_1321 fructose-1,6-bisphosphatase; PFAM: Fructose-1,6-bisphosphatase.
       0.620
pheT
TIGRFAM: Phenylalanyl-tRNA synthetase, class IIc, beta subunit, bacterial; KEGG: dvl:Dvul_0712 phenylalanyl-tRNA synthetase subunit beta.
  
  
 0.617
pheS
KEGG: dvl:Dvul_0711 phenylalanyl-tRNA synthetase subunit alpha; TIGRFAM: Phenylalanyl-tRNA synthetase, class IIc, alpha subunit; PFAM: Phenylalanyl-tRNA synthetase alpha chain; Phenylalanyl-tRNA synthetase, class II, N-terminal; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.
 
   
 0.606
Your Current Organism:
Desulfovibrio alaskensis
NCBI taxonomy Id: 207559
Other names: D. alaskensis G20, Desulfovibrio alaskensis G20, Desulfovibrio alaskensis str. G20, Desulfovibrio alaskensis strain G20, Desulfovibrio desulfuricans subsp. desulfuricans str. G20
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