STRINGSTRING
Dde_2534 Dde_2534 Dde_3698 Dde_3698 Dde_2876 Dde_2876 Dde_0430 Dde_0430 Dde_2889 Dde_2889 Dde_1987 Dde_1987 Dde_0431 Dde_0431 Dde_3612 Dde_3612 Dde_0426 Dde_0426 Dde_2533 Dde_2533 Dde_3678 Dde_3678
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
Dde_2534PFAM: Glycosyl transferase, family 2; KEGG: ret:RHE_CH01521 putative glucosyltransferase protein. (325 aa)    
Predicted Functional Partners:
Dde_3698
PFAM: Glycosyl transferase, family 2; KEGG: dvu:DVU0076 glycosyl transferase group 2 family protein.
  
     0.764
Dde_2876
PFAM: Glycosyl transferase, family 2; KEGG: rpt:Rpal_4471 glycosyl transferase family 2.
  
     0.762
Dde_0430
PFAM: Glycosyl transferase, family 2; KEGG: drm:Dred_1399 cell wall biogenesis glycosyltransferase-like protein.
 
  
 0.753
Dde_2889
PFAM: Glycosyl transferase, family 2; KEGG: dba:Dbac_3281 glycosyl transferase family 2.
 
   
 0.748
Dde_1987
PFAM: Glycosyl transferase, family 2; KEGG: lip:LI0929 cell wall biosynthesis glycosyltransferase.
  
    0.725
Dde_0431
PFAM: CDP-glycerol glycerophosphotransferase; Glycosyl transferase, group 1; Glycosyl transferase, family 2; KEGG: dvu:DVU2993 glycosyl transferase group 1/2 family protein.
  
    0.665
Dde_3612
PFAM: Glycosyl transferase, family 2; KEGG: dvm:DvMF_2329 glycosyl transferase family 2.
  
     0.600
Dde_0426
PFAM: Glycosyl transferase, family 2; KEGG: dvm:DvMF_1842 glycosyl transferase family 2.
  
    0.557
Dde_2533
KEGG: azl:AZL_008920 two-component response regulator; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region.
  
    0.471
Dde_3678
PFAM: Glycosyl transferase, family 2; KEGG: npu:Npun_R1218 filamentous haemagglutinin outer membrane protein.
 
  
0.446
Your Current Organism:
Desulfovibrio alaskensis
NCBI taxonomy Id: 207559
Other names: D. alaskensis G20, Desulfovibrio alaskensis G20, Desulfovibrio alaskensis str. G20, Desulfovibrio alaskensis strain G20, Desulfovibrio desulfuricans subsp. desulfuricans str. G20
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