STRINGSTRING
Dde_2560 Dde_2560 Dde_2114 Dde_2114 Dde_2781 Dde_2781 Dde_2778 Dde_2778 Dde_0210 Dde_0210 Dde_0465 Dde_0465 Dde_1203 Dde_1203 Dde_2066 Dde_2066 Dde_2151 Dde_2151 dnaK dnaK Dde_3078 Dde_3078
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Dde_2560Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides. (215 aa)    
Predicted Functional Partners:
Dde_2114
PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: dvm:DvMF_0475 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen.
  
 0.884
Dde_2781
Thioredoxin domain-containing protein; PFAM: Thioredoxin domain; KEGG: das:Daes_0507 thioredoxin domain-containing protein.
  
 0.884
Dde_2778
TIGRFAM: Redox-active disulfide protein 2; KEGG: dsa:Desal_2205 redox-active disulfide protein 2.
  
 0.873
Dde_0210
KEGG: dvu:DVU0283 AhpF family protein/thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulfide oxidoreductase; Pyridine nucleotide-disulfide oxidoreductase, NAD-binding region.
  
 
 0.810
Dde_0465
Thioredoxin-disulfide reductase; KEGG: dsa:Desal_1363 FAD-dependent pyridine nucleotide-disulfide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulfide oxidoreductase; Pyridine nucleotide-disulfide oxidoreductase, NAD-binding region.
  
 
 0.810
Dde_1203
Thioredoxin-disulfide reductase; KEGG: dsa:Desal_0408 FAD-dependent pyridine nucleotide-disulfide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulfide oxidoreductase; Pyridine nucleotide-disulfide oxidoreductase, NAD-binding region.
  
 
 0.810
Dde_2066
TIGRFAM: Thioredoxin reductase; KEGG: dvl:Dvul_1324 thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulfide oxidoreductase.
  
 
 0.810
Dde_2151
KEGG: dvl:Dvul_1622 thioredoxin-disulfide reductase; PFAM: FAD-dependent pyridine nucleotide-disulfide oxidoreductase; Pyridine nucleotide-disulfide oxidoreductase, NAD-binding region.
  
 
 0.810
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
   
 
 0.743
Dde_3078
Fe-S cluster assembly protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.
  
 
 0.735
Your Current Organism:
Desulfovibrio alaskensis
NCBI taxonomy Id: 207559
Other names: D. alaskensis G20, Desulfovibrio alaskensis G20, Desulfovibrio alaskensis str. G20, Desulfovibrio alaskensis strain G20, Desulfovibrio desulfuricans subsp. desulfuricans str. G20
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