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lysA-2 lysA-2 dapF dapF Dde_0572 Dde_0572 lysA lysA murE murE dapA dapA Dde_2665 Dde_2665 dapB dapB Dde_0189 Dde_0189 Dde_3041 Dde_3041 Dde_2667 Dde_2667
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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lysA-2Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. (434 aa)    
Predicted Functional Partners:
dapF
Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.
 
 0.971
Dde_0572
Carboxynorspermidine synthase; PFAM: Saccharopine dehydrogenase; KEGG: dvl:Dvul_2516 saccharopine dehydrogenase.
  
 
 0.921
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
  
  
 
0.919
murE
UDP-N-acetylmuramyl-tripeptide synthetase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.
     
 0.913
dapA
Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
  
 0.873
Dde_2665
Putative transcriptional regulator for lysine biosynthesis and transport; PFAM: Transcriptional regulator TrmB; KEGG: dvl:Dvul_0680 TrmB family transcriptional regulator.
     
 0.845
dapB
Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate.
 
  
 0.816
Dde_0189
Lysine 2,3-aminomutase YodO family protein; TIGRFAM: Protein of unknown function DUF160; KEGG: dsa:Desal_3316 lysine 2,3-aminomutase YodO family protein; PFAM: Radical SAM.
     
 0.801
Dde_3041
Lysine 2,3-aminomutase YodO family protein; TIGRFAM: Protein of unknown function DUF160; KEGG: sfu:Sfum_0711 lysine 2,3-aminomutase YodO family protein; PFAM: Radical SAM.
     
 0.801
Dde_2667
Amidohydrolase; TIGRFAM: Peptidase M20D, amidohydrolase; KEGG: dvm:DvMF_1012 amidohydrolase; PFAM: Peptidase M20; Peptidase M20, dimerisation.
 
   
 0.611
Your Current Organism:
Desulfovibrio alaskensis
NCBI taxonomy Id: 207559
Other names: D. alaskensis G20, Desulfovibrio alaskensis G20, Desulfovibrio alaskensis str. G20, Desulfovibrio alaskensis strain G20, Desulfovibrio desulfuricans subsp. desulfuricans str. G20
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