STRINGSTRING
Dde_2768 Dde_2768 Dde_0260 Dde_0260 Dde_0610 Dde_0610 Dde_0259 Dde_0259 Dde_0611 Dde_0611 Dde_0261 Dde_0261 Dde_0609 Dde_0609 Dde_2831 Dde_2831 Dde_0262 Dde_0262 Dde_0608 Dde_0608 Dde_0258 Dde_0258
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
Dde_2768PFAM: Extracellular ligand-binding receptor; KEGG: sfu:Sfum_2306 extracellular ligand-binding receptor. (417 aa)    
Predicted Functional Partners:
Dde_0260
ABC-type transporter, integral membrane subunit; PFAM: Bacterial inner-membrane translocator; KEGG: dvl:Dvul_2252 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.980
Dde_0610
ABC-type transporter, integral membrane subunit; PFAM: Bacterial inner-membrane translocator; KEGG: dba:Dbac_2500 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.979
Dde_0259
ABC-type transporter, integral membrane subunit; PFAM: Bacterial inner-membrane translocator; KEGG: dba:Dbac_3207 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.978
Dde_0611
ABC-type transporter, integral membrane subunit; PFAM: Bacterial inner-membrane translocator; KEGG: dba:Dbac_2501 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.978
Dde_0261
Monosaccharide-transporting ATPase; PFAM: ABC transporter-like; KEGG: dvm:DvMF_2753 ABC transporter related; SMART: ATPase, AAA+ type, core.
 
 
 0.977
Dde_0609
Sulfate-transporting ATPase; PFAM: ABC transporter-like; KEGG: dba:Dbac_2499 ABC transporter related; SMART: ATPase, AAA+ type, core.
 
 
 0.977
Dde_2831
PFAM: Extracellular ligand-binding receptor; KEGG: dvm:DvMF_2773 extracellular ligand-binding receptor.
  
  
  0.976
Dde_0262
Fe(3+)-transporting ATPase; PFAM: ABC transporter-like; KEGG: dvm:DvMF_2754 ABC transporter related; SMART: ATPase, AAA+ type, core.
 
 
 0.973
Dde_0608
Monosaccharide-transporting ATPase; PFAM: ABC transporter-like; KEGG: dba:Dbac_2498 ABC transporter related; SMART: ATPase, AAA+ type, core.
 
 
 0.973
Dde_0258
PFAM: Extracellular ligand-binding receptor; KEGG: dvu:DVU0712 amino acid ABC transporter periplasmic-binding protein.
  
  
 
0.929
Your Current Organism:
Desulfovibrio alaskensis
NCBI taxonomy Id: 207559
Other names: D. alaskensis G20, Desulfovibrio alaskensis G20, Desulfovibrio alaskensis str. G20, Desulfovibrio alaskensis strain G20, Desulfovibrio desulfuricans subsp. desulfuricans str. G20
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