Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Dde_0140 | Dde_2787 | PFAM: Phosphoribosyltransferase; KEGG: dra:DR_0878 adenine phosphoribosyltransferase. | PFAM: Protein of unknown function DUF81; KEGG: dat:HRM2_16110 putative permease. | 0.555 |
Dde_2786 | Dde_2787 | SMART: Rhodanese-like; KEGG: dat:HRM2_16100 rhodanese-like domain family protein. | PFAM: Protein of unknown function DUF81; KEGG: dat:HRM2_16110 putative permease. | 0.831 |
Dde_2787 | Dde_0140 | PFAM: Protein of unknown function DUF81; KEGG: dat:HRM2_16110 putative permease. | PFAM: Phosphoribosyltransferase; KEGG: dra:DR_0878 adenine phosphoribosyltransferase. | 0.555 |
Dde_2787 | Dde_2786 | PFAM: Protein of unknown function DUF81; KEGG: dat:HRM2_16110 putative permease. | SMART: Rhodanese-like; KEGG: dat:HRM2_16100 rhodanese-like domain family protein. | 0.831 |
Dde_2787 | Dde_4044 | PFAM: Protein of unknown function DUF81; KEGG: dat:HRM2_16110 putative permease. | KEGG: dsa:Desal_1109 hypothetical protein. | 0.418 |
Dde_4044 | Dde_2787 | KEGG: dsa:Desal_1109 hypothetical protein. | PFAM: Protein of unknown function DUF81; KEGG: dat:HRM2_16110 putative permease. | 0.418 |