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Dde_2792 Dde_2792 Dde_2793 Dde_2793 Dde_2791 Dde_2791 Dde_4055 Dde_4055 Dde_0464 Dde_0464 Dde_1202 Dde_1202 Dde_2067 Dde_2067 Dde_3416 Dde_3416 ybeY ybeY Dde_2931 Dde_2931 truA truA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Dde_2792Arsenate reductase; SMART: Protein-tyrosine phosphatase, low molecular weight; KEGG: das:Daes_1099 protein-tyrosine phosphatase, low molecular weight. (146 aa)    
Predicted Functional Partners:
Dde_2793
Arsenate reductase; KEGG: dsa:Desal_2313 protein-tyrosine phosphatase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight.
 
    
0.827
Dde_2791
KEGG: dsa:Desal_2201 arsenical-resistance protein; TIGRFAM: Arsenical-resistance protein ACR3; PFAM: Bile acid:sodium symporter.
  
  
 0.807
Dde_4055
KEGG: dsa:Desal_2202 ArsR family transcriptional regulator; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR.
  
  
 0.602
Dde_0464
PFAM: Glutaredoxin; KEGG: dvl:Dvul_2555 glutaredoxin.
  
 
 0.545
Dde_1202
Thioredoxin domain-containing protein; PFAM: Thioredoxin domain; KEGG: dsa:Desal_0409 thioredoxin.
  
 
 0.545
Dde_2067
Thioredoxin; KEGG: dvm:DvMF_0402 thioredoxin; TIGRFAM: Thioredoxin; PFAM: Thioredoxin domain; Belongs to the thioredoxin family.
  
 
 0.545
Dde_3416
TIGRFAM: Thioredoxin; KEGG: mfa:Mfla_1161 thioredoxin; PFAM: Thioredoxin domain.
  
 
 0.545
ybeY
Protein of unknown function UPF0054; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
  
   0.537
Dde_2931
TIGRFAM: Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; KEGG: dvm:DvMF_2691 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: Mannose-6-phosphate isomerase, type II, C-terminal; Nucleotidyl transferase.
     
 0.537
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
   
   0.533
Your Current Organism:
Desulfovibrio alaskensis
NCBI taxonomy Id: 207559
Other names: D. alaskensis G20, Desulfovibrio alaskensis G20, Desulfovibrio alaskensis str. G20, Desulfovibrio alaskensis strain G20, Desulfovibrio desulfuricans subsp. desulfuricans str. G20
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