STRINGSTRING
Dde_2871 Dde_2871 Dde_2870 Dde_2870 Dde_2868 Dde_2868 Dde_2869 Dde_2869 Dde_2867 Dde_2867
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dde_2871PFAM: Transposase, IS204/IS1001/IS1096/IS1165; KEGG: kpn:KPN_pKPN4p07083 putative transposase. (422 aa)    
Predicted Functional Partners:
Dde_2870
KEGG: kpn:KPN_pKPN4p07084 hypothetical protein; PFAM: Restriction endonuclease, type I, EcoRI, R subunit/Type III, Res subunit, N-terminal; Restriction endonuclease, type I, R subunit/Type III, Res subunit; SMART: DEAD-like helicase, N-terminal.
 
     0.833
Dde_2868
PFAM: DNA methylase, adenine-specific; KEGG: kpn:KPN_pKPN4p07086 putative type I restriction-modification system DNA methylase.
 
   
 0.820
Dde_2869
Restriction modification system DNA specificity domain-containing protein; PFAM: Restriction endonuclease, type I, S subunit, EcoBI; KEGG: pap:PSPA7_0076 type I restriction-modification system subunit S.
 
     0.817
Dde_2867
PFAM: Filamentation induced by cAMP/death on curing, related; KEGG: glo:Glov_2140 filamentation induced by cAMP protein Fic.
       0.408
Your Current Organism:
Desulfovibrio alaskensis
NCBI taxonomy Id: 207559
Other names: D. alaskensis G20, Desulfovibrio alaskensis G20, Desulfovibrio alaskensis str. G20, Desulfovibrio alaskensis strain G20, Desulfovibrio desulfuricans subsp. desulfuricans str. G20
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.