STRINGSTRING
Dde_2930 Dde_2930 Dde_2183 Dde_2183 Dde_2182 Dde_2182 Dde_2693 Dde_2693 Dde_2931 Dde_2931 Dde_3696 Dde_3696 Dde_3694 Dde_3694 Dde_2042 Dde_2042 Dde_0421 Dde_0421 Dde_0426 Dde_0426 Dde_0431 Dde_0431
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Dde_2930dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. (185 aa)    
Predicted Functional Partners:
Dde_2183
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family.
 
 0.999
Dde_2182
TIGRFAM: dTDP-glucose 4,6-dehydratase; KEGG: dvm:DvMF_0141 dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
 0.997
Dde_2693
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
 0.994
Dde_2931
TIGRFAM: Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; KEGG: dvm:DvMF_2691 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: Mannose-6-phosphate isomerase, type II, C-terminal; Nucleotidyl transferase.
  
  
 0.942
Dde_3696
KEGG: dvm:DvMF_1910 polysaccharide biosynthesis domain-containing protein.
     
  0.900
Dde_3694
TIGRFAM: Glucose-1-phosphate cytidylyltransferase; KEGG: dvl:Dvul_2889 glucose-1-phosphate cytidylyltransferase; PFAM: Nucleotidyl transferase.
 
  
 0.885
Dde_2042
TIGRFAM: Nucleotide sugar dehydrogenase; KEGG: dvm:DvMF_0282 nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase, N-terminal; UDP-glucose/GDP-mannose dehydrogenase, C-terminal; UDP-glucose/GDP-mannose dehydrogenase, dimerisation.
  
  
 0.854
Dde_0421
PFAM: Acylneuraminate cytidylyltransferase; KEGG: drt:Dret_0616 acylneuraminate cytidylyltransferase.
  
  
 0.659
Dde_0426
PFAM: Glycosyl transferase, family 2; KEGG: dvm:DvMF_1842 glycosyl transferase family 2.
  
  
 0.602
Dde_0431
PFAM: CDP-glycerol glycerophosphotransferase; Glycosyl transferase, group 1; Glycosyl transferase, family 2; KEGG: dvu:DVU2993 glycosyl transferase group 1/2 family protein.
  
  
 0.602
Your Current Organism:
Desulfovibrio alaskensis
NCBI taxonomy Id: 207559
Other names: D. alaskensis G20, Desulfovibrio alaskensis G20, Desulfovibrio alaskensis str. G20, Desulfovibrio alaskensis strain G20, Desulfovibrio desulfuricans subsp. desulfuricans str. G20
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