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ubiE ubiE Dde_2191 Dde_2191 Dde_3184 Dde_3184 Dde_1323 Dde_1323 Dde_3189 Dde_3189 Dde_1392 Dde_1392 Dde_2277 Dde_2277 bioB bioB mqnA mqnA Dde_3205 Dde_3205 ubiX ubiX
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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ubiEUbiquinone/menaquinone biosynthesis methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2). (240 aa)    
Predicted Functional Partners:
Dde_2191
PFAM: Methyltransferase type 11; KEGG: dvm:DvMF_0133 methyltransferase type 11.
  
  
  0.915
Dde_3184
KEGG: dvl:Dvul_0213 hypothetical protein.
       0.804
Dde_1323
PFAM: Carboxylyase-related; KEGG: dvl:Dvul_0938 carboxylyase-like protein; Belongs to the UbiD family.
 
  
 0.665
Dde_3189
Trans-hexaprenyltranstransferase; KEGG: dvu:DVU3179 octaprenyl-diphosphate synthase; PFAM: Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.
 
  
 0.568
Dde_1392
KEGG: dvl:Dvul_2015 4-hydroxybenzoate polyprenyltransferase; TIGRFAM: 4-hydroxybenzoate polyprenyltransferase related; PFAM: UbiA prenyltransferase; Belongs to the UbiA prenyltransferase family.
 
   
 0.501
Dde_2277
Radical SAM domain protein; KEGG: dsa:Desal_0368 biotin synthase; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB.
  
  
 0.467
bioB
Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.
  
  
 0.467
mqnA
Protein of unknown function DUF178; Catalyzes the dehydration of chorismate into 3-[(1- carboxyvinyl)oxy]benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2).
 
   
 0.460
Dde_3205
KEGG: dvm:DvMF_2472 cytochrome d ubiquinol oxidase, subunit II; TIGRFAM: Cytochrome bd ubiquinol oxidase, subunit II; PFAM: Cytochrome bd ubiquinol oxidase, subunit II.
 
 
   0.439
ubiX
3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.
     
 0.433
Your Current Organism:
Desulfovibrio alaskensis
NCBI taxonomy Id: 207559
Other names: D. alaskensis G20, Desulfovibrio alaskensis G20, Desulfovibrio alaskensis str. G20, Desulfovibrio alaskensis strain G20, Desulfovibrio desulfuricans subsp. desulfuricans str. G20
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