STRINGSTRING
Dde_3268 Dde_3268 Dde_3267 Dde_3267 Dde_3266 Dde_3266 Dde_3265 Dde_3265 Dde_3270 Dde_3270 Dde_3271 Dde_3271 Dde_3272 Dde_3272 Dde_3273 Dde_3273 Dde_3274 Dde_3274 Dde_3275 Dde_3275 Dde_3276 Dde_3276
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dde_3268Hypothetical protein. (77 aa)    
Predicted Functional Partners:
Dde_3267
Alcohol dehydrogenase; KEGG: dsa:Desal_0480 iron-containing alcohol dehydrogenase; PFAM: Alcohol dehydrogenase, iron-type.
       0.768
Dde_3266
PFAM: NADH:ubiquinone oxidoreductase, 51kDa subunit; Soluble ligand binding domain; KEGG: dsa:Desal_0481 respiratory-chain NADH dehydrogenase domain 51 kDa subunit.
       0.534
Dde_3265
KEGG: dsa:Desal_0482 microcompartments protein; PFAM: Microcompartment protein, bacteria; SMART: Microcompartment protein, bacteria.
       0.514
Dde_3270
KEGG: cts:Ctha_1877 microcompartments protein; PFAM: Microcompartment protein, bacteria; SMART: Microcompartment protein, bacteria.
       0.483
Dde_3271
KEGG: dps:DP1826 hypothetical protein.
       0.441
Dde_3272
PFAM: Microcompartment protein, bacteria; KEGG: dsa:Desal_0477 microcompartments protein.
       0.441
Dde_3273
PFAM: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml; KEGG: dsa:Desal_0476 ethanolamine utilization protein EutN/carboxysome structural protein CcmL.
       0.441
Dde_3274
KEGG: dsa:Desal_0475 hypothetical protein.
       0.431
Dde_3275
Putative shell protein; TIGRFAM: Ethanolamine utilisation EutJ; KEGG: dsa:Desal_0474 ethanolamine utilization protein EutJ.
       0.428
Dde_3276
Propanediol utilization protein; Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate.
       0.428
Your Current Organism:
Desulfovibrio alaskensis
NCBI taxonomy Id: 207559
Other names: D. alaskensis G20, Desulfovibrio alaskensis G20, Desulfovibrio alaskensis str. G20, Desulfovibrio alaskensis strain G20, Desulfovibrio desulfuricans subsp. desulfuricans str. G20
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