STRINGSTRING
Dde_3433 Dde_3433 Dde_3432 Dde_3432 Dde_3435 Dde_3435 Dde_3434 Dde_3434 cbiA cbiA cbiA-2 cbiA-2 Dde_1669 Dde_1669 Dde_2922 Dde_2922 Dde_3431 Dde_3431 Dde_2920 Dde_2920 Dde_2921 Dde_2921
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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[Homology]
Score
Dde_3433KEGG: dvl:Dvul_2608 ATPase; PFAM: ATPase associated with various cellular activities, AAA-5; SMART: ATPase, AAA+ type, core. (338 aa)    
Predicted Functional Partners:
Dde_3432
KEGG: dvu:DVU2033 hypothetical protein.
 
     0.931
Dde_3435
SMART: von Willebrand factor, type A; KEGG: dvl:Dvul_2614 von Willebrand factor type A.
 
  
 0.917
Dde_3434
KEGG: dvl:Dvul_2612 hypothetical protein.
 
  
 0.915
cbiA
Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.
     
 0.900
cbiA-2
Cobyrinic acid A,C-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.
     
 0.900
Dde_1669
ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids.
     
  0.900
Dde_2922
KEGG: dvl:Dvul_2608 ATPase; PFAM: ATPase associated with various cellular activities, AAA-5; SMART: ATPase, AAA+ type, core.
  
  
 
0.900
Dde_3431
ERF family protein; PFAM: ERF; KEGG: dvu:DVU2032 ERF family protein.
 
   
 0.837
Dde_2920
SMART: von Willebrand factor, type A; KEGG: dvl:Dvul_2614 von Willebrand factor type A.
 
  
 0.808
Dde_2921
KEGG: dvl:Dvul_2612 hypothetical protein.
 
  
 0.805
Your Current Organism:
Desulfovibrio alaskensis
NCBI taxonomy Id: 207559
Other names: D. alaskensis G20, Desulfovibrio alaskensis G20, Desulfovibrio alaskensis str. G20, Desulfovibrio alaskensis strain G20, Desulfovibrio desulfuricans subsp. desulfuricans str. G20
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