STRINGSTRING
Dde_3529 Dde_3529 Dde_3530 Dde_3530 Dde_1213 Dde_1213 Dde_3528 Dde_3528 Dde_0223 Dde_0223 Dde_0682 Dde_0682 Dde_1076 Dde_1076 Dde_2944 Dde_2944 Dde_0526 Dde_0526 Dde_0527 Dde_0527 Dde_2390 Dde_2390
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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[Homology]
Score
Dde_3529KEGG: drt:Dret_2312 iron-sulfur binding protein. (362 aa)    
Predicted Functional Partners:
Dde_3530
PFAM: Oxidoreductase FAD/NAD(P)-binding; Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain; Oxidoreductase FAD-binding region; KEGG: dsa:Desal_0596 oxidoreductase FAD/NAD(P)-binding domain protein.
  0.997
Dde_1213
Sulfhydrogenase subunit gamma (sulfur reductase); PFAM: Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain; Oxidoreductase FAD-binding region; Oxidoreductase FAD/NAD(P)-binding; KEGG: dsa:Desal_0596 oxidoreductase FAD/NAD(P)-binding domain protein.
  0.990
Dde_3528
PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: drt:Dret_2313 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
 
     0.947
Dde_0223
PFAM: FAD-dependent pyridine nucleotide-disulfide oxidoreductase; KEGG: dvm:DvMF_0624 FAD-dependent pyridine nucleotide-disulfide oxidoreductase.
  
  
  0.915
Dde_0682
Nitrate reductase; KEGG: dsa:Desal_0371 molybdopterin oxidoreductase; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide-binding region; Molybdopterin oxidoreductase Fe4S4 region; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
   
 
  0.902
Dde_1076
Nitrate reductase; KEGG: dvm:DvMF_0320 formate dehydrogenase; PFAM: Molybdopterin oxidoreductase; Molybdopterin oxidoreductase Fe4S4 region; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
   
 
  0.902
Dde_2944
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
   
 
  0.901
Dde_0526
TIGRFAM: Sulphite reductase, dissimilatory-type alpha subunit; KEGG: dvl:Dvul_2532 sulfite reductase, dissimilatory-type subunit alpha; PFAM: Nitrite/sulphite reductase 4Fe-4S region.
     
  0.900
Dde_0527
TIGRFAM: Sulphite reductase, dissimilatory-type beta subunit; KEGG: dvl:Dvul_2531 sulfite reductase, dissimilatory-type subunit beta; PFAM: Nitrite/sulphite reductase 4Fe-4S region; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like.
     
  0.900
Dde_2390
PFAM: Nitrite/sulphite reductase 4Fe-4S region; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: dvm:DvMF_0885 nitrite and sulphite reductase 4Fe-4S region.
     
  0.900
Your Current Organism:
Desulfovibrio alaskensis
NCBI taxonomy Id: 207559
Other names: D. alaskensis G20, Desulfovibrio alaskensis G20, Desulfovibrio alaskensis str. G20, Desulfovibrio alaskensis strain G20, Desulfovibrio desulfuricans subsp. desulfuricans str. G20
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