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Dde_3550 Dde_3550 cobQ cobQ Dde_3181 Dde_3181 cobT cobT Dde_3540 Dde_3540 Dde_3495 Dde_3495 cobS cobS Dde_3543 Dde_3543 Dde_3539 Dde_3539 Dde_3541 Dde_3541 Dde_3551 Dde_3551
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Dde_3550PFAM: Phosphoglycerate mutase; KEGG: dvl:Dvul_1583 phosphoglycerate mutase. (242 aa)    
Predicted Functional Partners:
cobQ
Cobyric acid synthase; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.
 
  
 0.648
Dde_3181
precorrin-3B C17-methyltransferase; TIGRFAM: Cobalamin (vitamin B12) biosynthesis CobJ/CibH, precorrin-3B C17-methyltransferase, core; KEGG: cag:Cagg_1264 precorrin-3B C17-methyltransferase; PFAM: Cobalamin (vitamin B12) biosynthesis CbiG, core; Tetrapyrrole methylase.
  
  
 0.641
cobT
Nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB).
 
  
 0.628
Dde_3540
PFAM: Amine oxidase; Cysteine-rich region, CCG; KEGG: dvu:DVU1558 hypothetical protein.
 
     0.622
Dde_3495
Cobalbumin biosynthesis protein; Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate.
 
  
 0.616
cobS
Cobalamin-5-phosphate synthase CobS; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.
 
  
 0.612
Dde_3543
C_GCAxxG_C_C family protein; PFAM: CGCAxxGCC motif; KEGG: dvl:Dvul_1578 hypothetical protein.
 
     0.600
Dde_3539
KEGG: dvl:Dvul_1574 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; Ferredoxin; [2Fe-2S]-binding; Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead.
 
     0.587
Dde_3541
KEGG: dsa:Desal_0297 hypothetical protein.
 
     0.579
Dde_3551
PFAM: Protein of unknown function DUF1045; KEGG: rru:Rru_A1036 hypothetical protein.
       0.548
Your Current Organism:
Desulfovibrio alaskensis
NCBI taxonomy Id: 207559
Other names: D. alaskensis G20, Desulfovibrio alaskensis G20, Desulfovibrio alaskensis str. G20, Desulfovibrio alaskensis strain G20, Desulfovibrio desulfuricans subsp. desulfuricans str. G20
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