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Dde_3590 Dde_3590 Dde_3616 Dde_3616 Dde_3589 Dde_3589 Dde_2171 Dde_2171 Dde_2172 Dde_2172 Dde_2742 Dde_2742 Dde_1038 Dde_1038 Dde_3237 Dde_3237 proC proC rpmC rpmC rplX rplX
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Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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Score
Dde_3590Protein of unknown function UPF0001; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. (245 aa)    
Predicted Functional Partners:
Dde_3616
KEGG: dvu:DVU0365 hypothetical protein; TIGRFAM: Multi-copper polyphenol oxidoreductase, laccase; PFAM: Multi-copper polyphenol oxidoreductase, laccase.
  
  
 0.737
Dde_3589
PFAM: MotA/TolQ/ExbB proton channel; KEGG: dsa:Desal_3811 MotA/TolQ/ExbB proton channel.
       0.730
Dde_2171
KEGG: dvl:Dvul_1695 DivIVA family protein; TIGRFAM: DivIVA domain; PFAM: DivIVA.
  
  
 0.715
Dde_2172
PFAM: Protein of unknown function YGGT; KEGG: dvm:DvMF_0149 protein of unknown function YGGT.
  
  
 0.678
Dde_2742
PFAM: Phosphomethylpyrimidine kinase type-1; KEGG: dvu:DVU0769 pyridoxamine kinase; Belongs to the pyridoxine kinase family.
  
  
 0.678
Dde_1038
UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein.
  
    0.617
Dde_3237
SMART: Pyruvate-flavodoxin oxidoreductase, EKR domain; TIGRFAM: Pyruvate-flavodoxin oxidoreductase; KEGG: dvl:Dvul_0348 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; PFAM: Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal; Pyruvate-flavodoxin oxidoreductase, EKR domain; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; Thiamine pyrophosphate enzyme, C-terminal TPP-binding; Pyruvate/ketoisovalerate oxidoreductase; Belongs to the pyruvate:ferredoxin/flavodoxin oxidoreductase family.
  
  
 0.611
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
 
  
 0.592
rpmC
KEGG: dvm:DvMF_0087 50S ribosomal protein L29; TIGRFAM: Ribosomal protein L29; PFAM: Ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family.
   
    0.572
rplX
Ribosomal protein L24; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.
   
    0.563
Your Current Organism:
Desulfovibrio alaskensis
NCBI taxonomy Id: 207559
Other names: D. alaskensis G20, Desulfovibrio alaskensis G20, Desulfovibrio alaskensis str. G20, Desulfovibrio alaskensis strain G20, Desulfovibrio desulfuricans subsp. desulfuricans str. G20
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