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Dde_3638 Dde_3638 Dde_3639 Dde_3639 Dde_1255 Dde_1255 Dde_3637 Dde_3637 Dde_1257 Dde_1257 Dde_1256 Dde_1256 Dde_1258 Dde_1258 Dde_1253 Dde_1253 fumC fumC glcB glcB Dde_1254 Dde_1254
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Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Dde_3638TIGRFAM: Fe-S type hydro-lyases tartrate/fumarate beta region; KEGG: dvm:DvMF_2462 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fe-S type hydro-lyases tartrate/fumarate beta region. (181 aa)    
Predicted Functional Partners:
Dde_3639
TIGRFAM: Fe-S type hydro-lyases tartrate/fumarate alpha region; KEGG: das:Daes_2064 hydro-lyase, Fe-S type, tartrate/fumarate subfamily subunit alpha; PFAM: Fe-S type hydro-lyases tartrate/fumarate alpha region.
 
 0.999
Dde_1255
Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; TIGRFAM: Fe-S type hydro-lyases tartrate/fumarate alpha region; KEGG: dma:DMR_34300 fumarate hydratase; PFAM: Fe-S type hydro-lyases tartrate/fumarate alpha region.
 
 0.998
Dde_3637
PFAM: Malic enzyme, NAD-binding; Malic enzyme, N-terminal; KEGG: drt:Dret_0778 malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)).
 
 
 0.980
Dde_1257
TIGRFAM: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit; KEGG: dma:DMR_34280 fumarate reductase flavoprotein subunit; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal.
  
 
 0.954
Dde_1256
KEGG: drt:Dret_1067 fumarate reductase iron-sulfur subunit; TIGRFAM: Succinate dehydrogenase/fumarate reductase iron-sulphur protein.
  
 
 0.953
Dde_1258
PFAM: Fumarate reductase respiratory complex; KEGG: dma:DMR_05760 fumarate reductase cytochrome b subunit.
  
 
 0.939
Dde_1253
PFAM: Malic enzyme, NAD-binding; Malic enzyme, N-terminal; KEGG: dsa:Desal_0725 malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)).
 
 
 0.929
fumC
Fumarate hydratase class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
  
 
 0.927
glcB
Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
     
 0.908
Dde_1254
TIGRFAM: Fe-S type hydro-lyases tartrate/fumarate beta region; KEGG: dma:DMR_34310 L-tartrate dehydratase beta subunit; PFAM: Fe-S type hydro-lyases tartrate/fumarate beta region.
  
  
 
0.901
Your Current Organism:
Desulfovibrio alaskensis
NCBI taxonomy Id: 207559
Other names: D. alaskensis G20, Desulfovibrio alaskensis G20, Desulfovibrio alaskensis str. G20, Desulfovibrio alaskensis strain G20, Desulfovibrio desulfuricans subsp. desulfuricans str. G20
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