STRINGSTRING
potA potA Dde_3671 Dde_3671 Dde_3672 Dde_3672 Dde_3673 Dde_3673 Dde_0308 Dde_0308 Dde_0309 Dde_0309 Dde_0698 Dde_0698 Dde_1602 Dde_1602 Dde_1601 Dde_1601 Dde_0547 Dde_0547 Dde_3519 Dde_3519
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
potASpermidine/putrescine ABC transporter ATPase subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family. (373 aa)    
Predicted Functional Partners:
Dde_3671
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: dvm:DvMF_1959 binding-protein-dependent transport systems inner membrane component.
 0.998
Dde_3672
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: dvm:DvMF_1958 spermidine/putrescine ABC transporter membrane protein.
 
 
 0.998
Dde_3673
Extracellular solute-binding protein family 1; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.
 
 
 0.998
Dde_0308
KEGG: dvm:DvMF_2348 binding-protein-dependent transport systems inner membrane component.
 
 
 0.862
Dde_0309
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: dvm:DvMF_2349 binding-protein-dependent transport systems inner membrane component.
 
  
 0.755
Dde_0698
PFAM: ABC-2 type transporter; KEGG: das:Daes_1391 ABC-2 type transporter.
 
   
  0.670
Dde_1602
Xenobiotic-transporting ATPase; PFAM: ABC transporter-like; ABC transporter, transmembrane region; KEGG: gvi:gll0322 HlyB/MsbA family ABC transporter; SMART: ATPase, AAA+ type, core.
 
   
0.615
Dde_1601
Xenobiotic-transporting ATPase; PFAM: ABC transporter-like; KEGG: cts:Ctha_0998 ABC transporter-like protein; SMART: ATPase, AAA+ type, core.
 
   
0.575
Dde_0547
TIGRFAM: ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein; KEGG: das:Daes_1194 DNA internalization-like competence protein ComEC/Rec2; SMART: Beta-lactamase-like.
  
  
 0.547
Dde_3519
Molybdate ABC transporter, inner membrane subunit; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
  
 0.523
Your Current Organism:
Desulfovibrio alaskensis
NCBI taxonomy Id: 207559
Other names: D. alaskensis G20, Desulfovibrio alaskensis G20, Desulfovibrio alaskensis str. G20, Desulfovibrio alaskensis strain G20, Desulfovibrio desulfuricans subsp. desulfuricans str. G20
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