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Dde_3729 Dde_3729 Dde_3726 Dde_3726 Dde_3730 Dde_3730 Dde_3725 Dde_3725 Dde_3724 Dde_3724 Dde_3325 Dde_3325 Dde_0601 Dde_0601 Dde_3326 Dde_3326 phnC phnC Dde_3329 Dde_3329 Dde_3327 Dde_3327
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurrence
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Experiments
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[Homology]
Score
Dde_3729PFAM: ABC transporter-like; KEGG: dvl:Dvul_1231 phosphonate ABC transporter ATPase. (111 aa)    
Predicted Functional Partners:
Dde_3726
KEGG: dvm:DvMF_0597 phosphonate ABC transporter, ATPase subunit; PFAM: ABC transporter-like.
  
  0.994
Dde_3730
TIGRFAM: Phosphonate-binding periplasmic protein; KEGG: dvl:Dvul_1230 phosphonate ABC transporter, periplasmic phosphonate-binding protein.
 
 
 0.988
Dde_3725
KEGG: dvl:Dvul_1232 phosphonate ABC transporter inner membrane protein; TIGRFAM: Phosphonate uptake transporter; PFAM: Binding-protein-dependent transport systems inner membrane component.
 
 
 0.967
Dde_3724
KEGG: dvm:DvMF_0595 phosphonate ABC transporter, inner membrane subunit; TIGRFAM: Phosphonate uptake transporter; PFAM: Binding-protein-dependent transport systems inner membrane component.
 
 
 0.966
Dde_3325
TIGRFAM: ABC transporter, phosphonate, periplasmic substrate-binding protein; Phosphonate-binding periplasmic protein; KEGG: das:Daes_1171 phosphonate ABC transporter periplasmic phosphonate-binding protein.
 
 
 0.961
Dde_0601
TIGRFAM: Phosphonate-binding periplasmic protein; KEGG: dsa:Desal_2373 phosphonate ABC transporter periplasmic phosphonate-binding protein.
 
 
 0.938
Dde_3326
KEGG: das:Daes_1172 phosphonate ABC transporter inner membrane subunit; TIGRFAM: Phosphonate uptake transporter; PFAM: Binding-protein-dependent transport systems inner membrane component.
 
 
 0.924
phnC
Phosphonate ABC transporter, ATPase subunit; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
  
  
 
0.909
Dde_3329
KEGG: das:Daes_1164 phosphonate C-P lyase system protein PhnH; TIGRFAM: Bacterial phosphonate metabolism; PFAM: Bacterial phosphonate metabolism.
  
  
 0.690
Dde_3327
Transcriptional regulator, GntR family with UTRA sensor domain-containing protein; TIGRFAM: Phosphonate C-P lyase system, transcriptional regulator PhnF; PFAM: UbiC transcription regulator-associated; HTH transcriptional regulator, GntR; KEGG: dba:Dbac_0812 phophonate C-P lyase system transcriptional regulator PhnF, GntR family; SMART: UbiC transcription regulator-associated; HTH transcriptional regulator, GntR.
  
  
 0.666
Your Current Organism:
Desulfovibrio alaskensis
NCBI taxonomy Id: 207559
Other names: D. alaskensis G20, Desulfovibrio alaskensis G20, Desulfovibrio alaskensis str. G20, Desulfovibrio alaskensis strain G20, Desulfovibrio desulfuricans subsp. desulfuricans str. G20
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