STRINGSTRING
AGE24083.1 AGE24083.1 rimI rimI AGE24081.1 AGE24081.1 AGE24082.1 AGE24082.1 AGE24080.1 AGE24080.1 oadA oadA tsaB tsaB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGE24083.1Hypothetical protein. (260 aa)    
Predicted Functional Partners:
rimI
Ribosomal-protein-alanine acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18.
  
    0.818
AGE24081.1
COG3095 Uncharacterized protein involved in chromosome partitioning.
       0.561
AGE24082.1
Hypothetical protein.
       0.561
AGE24080.1
Hypothetical protein; COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases).
     
 0.559
oadA
COG5016 Pyruvate/oxaloacetate carboxyltransferase.
  
    0.484
tsaB
Putative glycoprotease family protein; COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone.
  
    0.447
Your Current Organism:
Pseudomonas poae
NCBI taxonomy Id: 1282356
Other names: P. poae RE*1-1-14, Pseudomonas poae RE*1-1-14
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