STRINGSTRING
AGE24096.1 AGE24096.1 AGE24095.1 AGE24095.1 AGE24094.1 AGE24094.1 AGE26423.1 AGE26423.1 AGE25601.1 AGE25601.1 AGE28475.1 AGE28475.1 AGE24689.1 AGE24689.1 AGE24093.1 AGE24093.1 AGE28474.1 AGE28474.1 AGE25378.1 AGE25378.1 AGE26090.1 AGE26090.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGE24096.1Cobalt/zinc/cadmium resistance protein CzcA; COG3696 Putative silver efflux pump. (1051 aa)    
Predicted Functional Partners:
AGE24095.1
Cobalt/zinc/cadmium resistance protein CzcB; COG0845 Membrane-fusion protein.
 
 
 0.973
AGE24094.1
Putative metal transporter-like exported protein; COG1538 Outer membrane protein.
 
  
 0.953
AGE26423.1
COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.667
AGE25601.1
HlyD family secretion protein; COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.650
AGE28475.1
RND family efflux transporter MFP subunit; COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.624
AGE24689.1
Putative lipoprotein; COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.622
AGE24093.1
Cobalt/zinc/cadmium resistance protein CzcD; COG1230 Co/Zn/Cd efflux system component.
   
 0.606
AGE28474.1
RND family efflux transporter MFP subunit; COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.605
AGE25378.1
Secretion protein HlyD; COG0845 Membrane-fusion protein.
 
 
 0.544
AGE26090.1
Putative efflux system inner membrane protein; COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.534
Your Current Organism:
Pseudomonas poae
NCBI taxonomy Id: 1282356
Other names: P. poae RE*1-1-14, Pseudomonas poae RE*1-1-14
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