Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGE24099.1 | AGE24264.1 | H045_00115 | H045_00940 | Hypothetical protein. | Hypothetical protein; COG3471 Predicted periplasmic/secreted protein. | 0.528 |
AGE24099.1 | AGE24393.1 | H045_00115 | H045_01585 | Hypothetical protein. | Fusaric acid resistance protein FusBCD; COG1289 Predicted membrane protein. | 0.589 |
AGE24099.1 | AGE24409.1 | H045_00115 | H045_01665 | Hypothetical protein. | poly(beta-D-mannuronate) C5 epimerase AlgG. | 0.548 |
AGE24099.1 | AGE24411.1 | H045_00115 | H045_01675 | Hypothetical protein. | Alginate biosynthesis protein AlgK; COG0790 FOG: TPR repeat, SEL1 subfamily. | 0.608 |
AGE24099.1 | AGE24844.1 | H045_00115 | H045_03840 | Hypothetical protein. | (R)-3-hydroxydecanoyl-ACP:CoA transacylase; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily). | 0.541 |
AGE24099.1 | AGE24938.1 | H045_00115 | H045_04310 | Hypothetical protein. | Cell division inhibitor; Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1:1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division. | 0.534 |
AGE24099.1 | AGE25039.1 | H045_00115 | H045_04815 | Hypothetical protein. | Hypothetical protein. | 0.634 |
AGE24099.1 | AGE25236.1 | H045_00115 | H045_05810 | Hypothetical protein. | Hypothetical protein. | 0.607 |
AGE24099.1 | AGE26951.1 | H045_00115 | H045_14430 | Hypothetical protein. | Putative lipoprotein. | 0.543 |
AGE24099.1 | AGE28707.1 | H045_00115 | H045_23245 | Hypothetical protein. | Putative deacetylase; COG2120 Uncharacterized proteins, LmbE homologs. | 0.618 |
AGE24264.1 | AGE24099.1 | H045_00940 | H045_00115 | Hypothetical protein; COG3471 Predicted periplasmic/secreted protein. | Hypothetical protein. | 0.528 |
AGE24264.1 | AGE25236.1 | H045_00940 | H045_05810 | Hypothetical protein; COG3471 Predicted periplasmic/secreted protein. | Hypothetical protein. | 0.457 |
AGE24264.1 | AGE28707.1 | H045_00940 | H045_23245 | Hypothetical protein; COG3471 Predicted periplasmic/secreted protein. | Putative deacetylase; COG2120 Uncharacterized proteins, LmbE homologs. | 0.530 |
AGE24393.1 | AGE24099.1 | H045_01585 | H045_00115 | Fusaric acid resistance protein FusBCD; COG1289 Predicted membrane protein. | Hypothetical protein. | 0.589 |
AGE24409.1 | AGE24099.1 | H045_01665 | H045_00115 | poly(beta-D-mannuronate) C5 epimerase AlgG. | Hypothetical protein. | 0.548 |
AGE24409.1 | AGE24411.1 | H045_01665 | H045_01675 | poly(beta-D-mannuronate) C5 epimerase AlgG. | Alginate biosynthesis protein AlgK; COG0790 FOG: TPR repeat, SEL1 subfamily. | 0.986 |
AGE24409.1 | AGE24844.1 | H045_01665 | H045_03840 | poly(beta-D-mannuronate) C5 epimerase AlgG. | (R)-3-hydroxydecanoyl-ACP:CoA transacylase; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily). | 0.681 |
AGE24409.1 | AGE25039.1 | H045_01665 | H045_04815 | poly(beta-D-mannuronate) C5 epimerase AlgG. | Hypothetical protein. | 0.755 |
AGE24409.1 | AGE25236.1 | H045_01665 | H045_05810 | poly(beta-D-mannuronate) C5 epimerase AlgG. | Hypothetical protein. | 0.766 |
AGE24409.1 | AGE26951.1 | H045_01665 | H045_14430 | poly(beta-D-mannuronate) C5 epimerase AlgG. | Putative lipoprotein. | 0.743 |
page 1 of 4