STRINGSTRING
AGE24379.1 AGE24379.1 AGE25039.1 AGE25039.1 AGE24393.1 AGE24393.1 AGE24411.1 AGE24411.1 AGE24380.1 AGE24380.1 AGE24844.1 AGE24844.1 AGE25236.1 AGE25236.1 AGE24378.1 AGE24378.1 AGE28707.1 AGE28707.1 AGE24382.1 AGE24382.1 AGE24409.1 AGE24409.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGE24379.1Hypothetical protein. (438 aa)    
Predicted Functional Partners:
AGE25039.1
Hypothetical protein.
  
     0.663
AGE24393.1
Fusaric acid resistance protein FusBCD; COG1289 Predicted membrane protein.
  
     0.643
AGE24411.1
Alginate biosynthesis protein AlgK; COG0790 FOG: TPR repeat, SEL1 subfamily.
  
     0.636
AGE24380.1
Heavy metal sensor histidine kinase; Member of a two-component regulatory system.
 
     0.617
AGE24844.1
(R)-3-hydroxydecanoyl-ACP:CoA transacylase; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
  
     0.604
AGE25236.1
Hypothetical protein.
  
     0.600
AGE24378.1
Hypothetical protein; COG2199 FOG: GGDEF domain.
       0.578
AGE28707.1
Putative deacetylase; COG2120 Uncharacterized proteins, LmbE homologs.
  
     0.569
AGE24382.1
Hypothetical protein; COG0841 Cation/multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
    0.565
AGE24409.1
poly(beta-D-mannuronate) C5 epimerase AlgG.
  
     0.559
Your Current Organism:
Pseudomonas poae
NCBI taxonomy Id: 1282356
Other names: P. poae RE*1-1-14, Pseudomonas poae RE*1-1-14
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