STRINGSTRING
AGE24409.1 AGE24409.1 algL algL AGE24413.1 AGE24413.1 AGE24408.1 AGE24408.1 AGE24411.1 AGE24411.1 AGE24412.1 AGE24412.1 AGE24405.1 AGE24405.1 AGE24410.1 AGE24410.1 AGE25049.1 AGE25049.1 AGE24406.1 AGE24406.1 AGE24761.1 AGE24761.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AGE24409.1poly(beta-D-mannuronate) C5 epimerase AlgG. (517 aa)    
Predicted Functional Partners:
algL
poly(beta-D-mannuronate) lyase; Catalyzes the depolymerization of alginate by cleaving the beta-1,4 glycosidic bond between two adjacent sugar residues via a beta-elimination mechanism; Belongs to the polysaccharide lyase 5 family.
 
 
 0.998
AGE24413.1
Putative alginate biosynthesis-like protein; COG1215 Glycosyltransferases, probably involved in cell wall biogenesis.
 
 
 0.995
AGE24408.1
Alginate biosynthesis protein AlgX.
 
  
 0.987
AGE24411.1
Alginate biosynthesis protein AlgK; COG0790 FOG: TPR repeat, SEL1 subfamily.
 
  
 0.986
AGE24412.1
Alginate biosynthesis protein Alg44; COG1566 Multidrug resistance efflux pump.
  
 
 0.983
AGE24405.1
Alginate biosynthesis protein AlgJ.
 
  
 0.957
AGE24410.1
Alginate production protein.
  
  
 0.944
AGE25049.1
Hypothetical protein; COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component.
  
 
 0.865
AGE24406.1
Alginate biosynthesis protein AlgI; COG1696 Predicted membrane protein involved in D-alanine export; Belongs to the membrane-bound acyltransferase family.
 
  
 0.853
AGE24761.1
Hypothetical protein; COG1874 Beta-galactosidase.
 
     0.775
Your Current Organism:
Pseudomonas poae
NCBI taxonomy Id: 1282356
Other names: P. poae RE*1-1-14, Pseudomonas poae RE*1-1-14
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