STRINGSTRING
AGE24410.1 AGE24410.1 AGE24411.1 AGE24411.1 AGE24409.1 AGE24409.1 AGE24408.1 AGE24408.1 algL algL AGE24412.1 AGE24412.1 AGE24413.1 AGE24413.1 AGE24406.1 AGE24406.1 AGE24405.1 AGE24405.1 AGE24404.1 AGE24404.1 AGE24403.1 AGE24403.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AGE24410.1Alginate production protein. (495 aa)    
Predicted Functional Partners:
AGE24411.1
Alginate biosynthesis protein AlgK; COG0790 FOG: TPR repeat, SEL1 subfamily.
  
  
 0.949
AGE24409.1
poly(beta-D-mannuronate) C5 epimerase AlgG.
  
  
 0.944
AGE24408.1
Alginate biosynthesis protein AlgX.
  
  
 0.941
algL
poly(beta-D-mannuronate) lyase; Catalyzes the depolymerization of alginate by cleaving the beta-1,4 glycosidic bond between two adjacent sugar residues via a beta-elimination mechanism; Belongs to the polysaccharide lyase 5 family.
  
  
 0.925
AGE24412.1
Alginate biosynthesis protein Alg44; COG1566 Multidrug resistance efflux pump.
  
  
 0.851
AGE24413.1
Putative alginate biosynthesis-like protein; COG1215 Glycosyltransferases, probably involved in cell wall biogenesis.
  
  
 0.830
AGE24406.1
Alginate biosynthesis protein AlgI; COG1696 Predicted membrane protein involved in D-alanine export; Belongs to the membrane-bound acyltransferase family.
  
  
 0.829
AGE24405.1
Alginate biosynthesis protein AlgJ.
  
  
 0.809
AGE24404.1
Alginate biosynthesis protein AlgF.
  
  
 0.746
AGE24403.1
Alginate biosynthesis protein AlgA; COG0836 Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.726
Your Current Organism:
Pseudomonas poae
NCBI taxonomy Id: 1282356
Other names: P. poae RE*1-1-14, Pseudomonas poae RE*1-1-14
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