STRINGSTRING
AGE24621.1 AGE24621.1 AGE27032.1 AGE27032.1 AGE25681.1 AGE25681.1 AGE27856.1 AGE27856.1 AGE24570.1 AGE24570.1 AGE25347.1 AGE25347.1 AGE26584.1 AGE26584.1 AGE27786.1 AGE27786.1 AGE25674.1 AGE25674.1 AGE24804.1 AGE24804.1 AGE28660.1 AGE28660.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGE24621.1Putative regulatory protein; COG2932 Predicted transcriptional regulator. (244 aa)    
Predicted Functional Partners:
AGE27032.1
Hypothetical protein; COG4886 Leucine-rich repeat (LRR) protein.
  
     0.732
AGE25681.1
Lipase; COG2931 RTX toxins and related Ca2+-binding proteins.
  
  
 0.714
AGE27856.1
Phosphoglycerate mutase family protein; COG0406 Fructose-2,6-bisphosphatase.
  
     0.699
AGE24570.1
Hypothetical protein; COG4886 Leucine-rich repeat (LRR) protein.
  
     0.693
AGE25347.1
Putative oxidoreductase; COG1231 Monoamine oxidase.
  
     0.678
AGE26584.1
COG4886 Leucine-rich repeat (LRR) protein.
  
     0.638
AGE27786.1
TraX family protein.
  
     0.626
AGE25674.1
Metalloprotease; COG2931 RTX toxins and related Ca2+-binding proteins.
  
  
 0.625
AGE24804.1
Hypothetical protein; COG0726 Predicted xylanase/chitin deacetylase.
  
     0.621
AGE28660.1
Hypothetical protein; COG4258 Predicted exporter.
  
     0.587
Your Current Organism:
Pseudomonas poae
NCBI taxonomy Id: 1282356
Other names: P. poae RE*1-1-14, Pseudomonas poae RE*1-1-14
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