Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGE24645.1 | AGE24646.1 | H045_02845 | H045_02850 | Hypothetical protein. | DTW domain protein. | 0.437 |
AGE24646.1 | AGE24645.1 | H045_02850 | H045_02845 | DTW domain protein. | Hypothetical protein. | 0.437 |
AGE24646.1 | AGE24647.1 | H045_02850 | H045_02855 | DTW domain protein. | LuxR family DNA-binding response regulator; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. | 0.516 |
AGE24646.1 | AGE24648.1 | H045_02850 | H045_02860 | DTW domain protein. | Diacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid. | 0.451 |
AGE24646.1 | AGE26400.1 | H045_02850 | H045_11675 | DTW domain protein. | Hypothetical protein. | 0.418 |
AGE24646.1 | rmf | H045_02850 | H045_13895 | DTW domain protein. | Ribosome modulation factor-like protein; During stationary phase, converts 70S ribosomes to an inactive dimeric form (100S ribosomes); Belongs to the ribosome modulation factor family. | 0.412 |
AGE24647.1 | AGE24646.1 | H045_02855 | H045_02850 | LuxR family DNA-binding response regulator; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. | DTW domain protein. | 0.516 |
AGE24647.1 | AGE24648.1 | H045_02855 | H045_02860 | LuxR family DNA-binding response regulator; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. | Diacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid. | 0.613 |
AGE24648.1 | AGE24646.1 | H045_02860 | H045_02850 | Diacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid. | DTW domain protein. | 0.451 |
AGE24648.1 | AGE24647.1 | H045_02860 | H045_02855 | Diacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid. | LuxR family DNA-binding response regulator; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. | 0.613 |
AGE26400.1 | AGE24646.1 | H045_11675 | H045_02850 | Hypothetical protein. | DTW domain protein. | 0.418 |
rmf | AGE24646.1 | H045_13895 | H045_02850 | Ribosome modulation factor-like protein; During stationary phase, converts 70S ribosomes to an inactive dimeric form (100S ribosomes); Belongs to the ribosome modulation factor family. | DTW domain protein. | 0.412 |