STRINGSTRING
AGE24649.1 AGE24649.1 AGE28652.1 AGE28652.1 AGE25230.1 AGE25230.1 AGE25072.1 AGE25072.1 AGE24650.1 AGE24650.1 AGE28313.1 AGE28313.1 AGE24503.1 AGE24503.1 AGE27880.1 AGE27880.1 AGE25838.1 AGE25838.1 AGE24971.1 AGE24971.1 AGE25866.1 AGE25866.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGE24649.1COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (308 aa)    
Predicted Functional Partners:
AGE28652.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.701
AGE25230.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.687
AGE25072.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.669
AGE24650.1
Oxidoreductase FAD/NAD(P)-binding subunit; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
 
   
 0.644
AGE28313.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.643
AGE24503.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.618
AGE27880.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.586
AGE25838.1
Cat operon regulatory protein; COG0583 Transcriptional regulator.
  
     0.565
AGE24971.1
COG0583 Transcriptional regulator.
  
     0.564
AGE25866.1
COG0583 Transcriptional regulator.
  
     0.552
Your Current Organism:
Pseudomonas poae
NCBI taxonomy Id: 1282356
Other names: P. poae RE*1-1-14, Pseudomonas poae RE*1-1-14
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