STRINGSTRING
AGE24671.1 AGE24671.1 AGE27412.1 AGE27412.1 AGE24937.1 AGE24937.1 AGE24332.1 AGE24332.1 AGE28073.1 AGE28073.1 AGE28342.1 AGE28342.1 minE minE AGE27232.1 AGE27232.1 AGE27018.1 AGE27018.1 AGE26680.1 AGE26680.1 AGE24411.1 AGE24411.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGE24671.1TetR family transcriptional regulator; COG3226 Uncharacterized protein conserved in bacteria. (234 aa)    
Predicted Functional Partners:
AGE27412.1
Hypothetical protein.
  
     0.747
AGE24937.1
Hypothetical protein.
  
     0.676
AGE24332.1
Hypothetical protein.
  
     0.671
AGE28073.1
Hypothetical protein.
  
     0.645
AGE28342.1
Hypothetical protein.
  
     0.639
minE
Cell division topological specificity factor MinE; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.
   
    0.634
AGE27232.1
YaeQ family protein; COG4681 Uncharacterized protein conserved in bacteria.
   
    0.634
AGE27018.1
Alginate biosynthesis transcriptional activator AlgZ.
  
     0.599
AGE26680.1
COG2198 FOG: HPt domain.
  
     0.583
AGE24411.1
Alginate biosynthesis protein AlgK; COG0790 FOG: TPR repeat, SEL1 subfamily.
  
     0.569
Your Current Organism:
Pseudomonas poae
NCBI taxonomy Id: 1282356
Other names: P. poae RE*1-1-14, Pseudomonas poae RE*1-1-14
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