STRINGSTRING
AGE24744.1 AGE24744.1 AGE24743.1 AGE24743.1 AGE24751.1 AGE24751.1 AGE24750.1 AGE24750.1 AGE24746.1 AGE24746.1 AGE24745.1 AGE24745.1 AGE24748.1 AGE24748.1 AGE24747.1 AGE24747.1 mutM mutM ligD ligD AGE26446.1 AGE26446.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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[Homology]
Score
AGE24744.1Putative ATP-dependent helicase; COG1201 Lhr-like helicases. (826 aa)    
Predicted Functional Partners:
AGE24743.1
Hypothetical protein; COG1407 Predicted ICC-like phosphoesterases.
 
    0.955
AGE24751.1
Hypothetical protein; COG1236 Predicted exonuclease of the beta-lactamase fold involved in RNA processing.
 
    0.849
AGE24750.1
COG1793 ATP-dependent DNA ligase.
 
    0.848
AGE24746.1
Putative amino acid ABC transporter-like protein; COG3608 Predicted deacylase.
       0.606
AGE24745.1
Amino acid ABC transporter ATP-binding protein; COG4598 ABC-type histidine transport system, ATPase component.
       0.601
AGE24748.1
COG4215 ABC-type arginine transport system, permease component.
       0.591
AGE24747.1
Histidine/lysine/arginine/ornithine ABC transporter permease HisM; COG4160 ABC-type arginine/histidine transport system, permease component.
       0.590
mutM
Formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates.
  
  
 0.516
ligD
ATP-dependent DNA ligase; COG0708 Exonuclease III.
 
    0.479
AGE26446.1
Hypothetical protein.
 
     0.473
Your Current Organism:
Pseudomonas poae
NCBI taxonomy Id: 1282356
Other names: P. poae RE*1-1-14, Pseudomonas poae RE*1-1-14
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