STRINGSTRING
AGE24761.1 AGE24761.1 AGE24409.1 AGE24409.1 AGE24411.1 AGE24411.1 AGE27018.1 AGE27018.1 AGE24408.1 AGE24408.1 algL algL AGE28375.1 AGE28375.1 AGE25236.1 AGE25236.1 AGE25039.1 AGE25039.1 AGE24405.1 AGE24405.1 AGE24762.1 AGE24762.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGE24761.1Hypothetical protein; COG1874 Beta-galactosidase. (765 aa)    
Predicted Functional Partners:
AGE24409.1
poly(beta-D-mannuronate) C5 epimerase AlgG.
 
     0.775
AGE24411.1
Alginate biosynthesis protein AlgK; COG0790 FOG: TPR repeat, SEL1 subfamily.
  
     0.766
AGE27018.1
Alginate biosynthesis transcriptional activator AlgZ.
  
     0.758
AGE24408.1
Alginate biosynthesis protein AlgX.
  
     0.753
algL
poly(beta-D-mannuronate) lyase; Catalyzes the depolymerization of alginate by cleaving the beta-1,4 glycosidic bond between two adjacent sugar residues via a beta-elimination mechanism; Belongs to the polysaccharide lyase 5 family.
  
     0.747
AGE28375.1
Hypothetical protein.
  
     0.724
AGE25236.1
Hypothetical protein.
  
     0.712
AGE25039.1
Hypothetical protein.
  
     0.707
AGE24405.1
Alginate biosynthesis protein AlgJ.
  
     0.702
AGE24762.1
Esterase III; COG1680 Beta-lactamase class C and other penicillin binding proteins.
 
     0.682
Your Current Organism:
Pseudomonas poae
NCBI taxonomy Id: 1282356
Other names: P. poae RE*1-1-14, Pseudomonas poae RE*1-1-14
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.