STRINGSTRING
AGE24762.1 AGE24762.1 AGE24761.1 AGE24761.1 AGE25904.1 AGE25904.1 AGE26048.1 AGE26048.1 AGE24495.1 AGE24495.1 AGE28707.1 AGE28707.1 pdxH pdxH AGE24450.1 AGE24450.1 dinG dinG AGE25901.1 AGE25901.1 AGE28716.1 AGE28716.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGE24762.1Esterase III; COG1680 Beta-lactamase class C and other penicillin binding proteins. (381 aa)    
Predicted Functional Partners:
AGE24761.1
Hypothetical protein; COG1874 Beta-galactosidase.
 
     0.682
AGE25904.1
COG1020 Non-ribosomal peptide synthetase modules and related proteins.
  
  
 0.597
AGE26048.1
COG1020 Non-ribosomal peptide synthetase modules and related proteins.
  
  
 0.597
AGE24495.1
COG3141 Uncharacterized protein conserved in bacteria.
  
     0.540
AGE28707.1
Putative deacetylase; COG2120 Uncharacterized proteins, LmbE homologs.
 
     0.487
pdxH
Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).
 
     0.476
AGE24450.1
Hypothetical protein.
  
     0.468
dinG
ATP-dependent DNA helicase DinG; DNA-dependent ATPase and 5'-3' DNA helicase.
       0.467
AGE25901.1
Putative non-ribosomal antibiotic-related peptide synthase; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
  
  
 0.442
AGE28716.1
Hypothetical protein; COG0578 Glycerol-3-phosphate dehydrogenase.
  
     0.439
Your Current Organism:
Pseudomonas poae
NCBI taxonomy Id: 1282356
Other names: P. poae RE*1-1-14, Pseudomonas poae RE*1-1-14
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