STRINGSTRING
AGE24763.1 AGE24763.1 pdxH pdxH AGE24765.1 AGE24765.1 AGE24609.1 AGE24609.1 tolB tolB AGE24717.1 AGE24717.1 AGE24762.1 AGE24762.1 AGE28137.1 AGE28137.1 AGE25450.1 AGE25450.1 pal pal AGE26660.1 AGE26660.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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[Homology]
Score
AGE24763.1OmpA family protein; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins. (354 aa)    
Predicted Functional Partners:
pdxH
Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).
       0.719
AGE24765.1
17 kDa surface antigen; COG3133 Outer membrane lipoprotein.
 
  
 0.617
AGE24609.1
Putative exported flagellar protein; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins.
  
     0.602
tolB
Translocation protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 
 0.494
AGE24717.1
COG2825 Outer membrane protein.
 
 
 0.492
AGE24762.1
Esterase III; COG1680 Beta-lactamase class C and other penicillin binding proteins.
       0.437
AGE28137.1
COG3455 Uncharacterized protein conserved in bacteria.
 
 
 0.432
AGE25450.1
COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains).
 
 
 
 0.427
pal
Peptidoglycan-associated lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
     0.426
AGE26660.1
COG1360 Flagellar motor protein.
  
 
 0.417
Your Current Organism:
Pseudomonas poae
NCBI taxonomy Id: 1282356
Other names: P. poae RE*1-1-14, Pseudomonas poae RE*1-1-14
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