STRINGSTRING
AGE24765.1 AGE24765.1 AGE24183.1 AGE24183.1 AGE24763.1 AGE24763.1 AGE28710.1 AGE28710.1 AGE25094.1 AGE25094.1 AGE24873.1 AGE24873.1 AGE27215.1 AGE27215.1 AGE28699.1 AGE28699.1 AGE28698.1 AGE28698.1 pdxH pdxH bamA bamA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGE24765.117 kDa surface antigen; COG3133 Outer membrane lipoprotein. (154 aa)    
Predicted Functional Partners:
AGE24183.1
Hypothetical protein; Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety; Belongs to the PagL family.
  
  
 0.699
AGE24763.1
OmpA family protein; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins.
 
  
 0.617
AGE28710.1
Hypothetical protein; COG3642 Mn2+-dependent serine/threonine protein kinase.
  
     0.565
AGE25094.1
Hypothetical protein.
  
    0.564
AGE24873.1
Lipoprotein; COG3317 Uncharacterized lipoprotein.
  
  
 0.537
AGE27215.1
InaA protein.
  
     0.513
AGE28699.1
COG0515 Serine/threonine protein kinase.
  
     0.499
AGE28698.1
Putative lipopolysaccharide biosynthesis-like protein.
  
     0.489
pdxH
Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).
       0.485
bamA
Putative surface exported protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
 
 
 0.467
Your Current Organism:
Pseudomonas poae
NCBI taxonomy Id: 1282356
Other names: P. poae RE*1-1-14, Pseudomonas poae RE*1-1-14
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