STRINGSTRING
livM livM livG livG AGE24779.1 AGE24779.1 AGE24782.1 AGE24782.1 AGE28781.1 AGE28781.1 AGE28779.1 AGE28779.1 AGE24783.1 AGE24783.1 AGE28782.1 AGE28782.1 AGE28778.1 AGE28778.1 AGE28780.1 AGE28780.1 urtE urtE
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
livMLeucine/isoleucine/valine transporter permease subunit; COG4177 ABC-type branched-chain amino acid transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. (417 aa)    
Predicted Functional Partners:
livG
Leucine/isoleucine/valine transporter ATP-binding subunit; COG0411 ABC-type branched-chain amino acid transport systems, ATPase component.
 
 0.999
AGE24779.1
COG0410 ABC-type branched-chain amino acid transport systems, ATPase component; Belongs to the ABC transporter superfamily.
 
 0.998
AGE24782.1
COG0559 Branched-chain amino acid ABC-type transport system, permease components; Belongs to the binding-protein-dependent transport system permease family.
 
0.998
AGE28781.1
COG0411 ABC-type branched-chain amino acid transport systems, ATPase component.
 
 0.997
AGE28779.1
COG0559 Branched-chain amino acid ABC-type transport system, permease components; Belongs to the binding-protein-dependent transport system permease family.
 
 0.996
AGE24783.1
Leucine ABC transporter subunit substrate-binding protein LivK; COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component.
 
 
 0.995
AGE28782.1
COG0410 ABC-type branched-chain amino acid transport systems, ATPase component; Belongs to the ABC transporter superfamily.
 
 0.995
AGE28778.1
COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component.
 
 
 0.992
AGE28780.1
COG4177 ABC-type branched-chain amino acid transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
  
  
 
0.904
urtE
Urea ABC transporter ATP-binding protein UrtE; COG0410 ABC-type branched-chain amino acid transport systems, ATPase component.
  
 0.844
Your Current Organism:
Pseudomonas poae
NCBI taxonomy Id: 1282356
Other names: P. poae RE*1-1-14, Pseudomonas poae RE*1-1-14
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