STRINGSTRING
AGE24795.1 AGE24795.1 AGE24796.1 AGE24796.1 AGE25328.1 AGE25328.1 AGE25227.1 AGE25227.1 AGE25848.1 AGE25848.1 AGE25861.1 AGE25861.1 AGE25968.1 AGE25968.1 pcaF pcaF pcaH pcaH pcaG pcaG pcaD pcaD
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
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[Homology]
Score
AGE24795.1COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit. (285 aa)    
Predicted Functional Partners:
AGE24796.1
COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit.
 0.999
AGE25328.1
COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit.
  
 
 0.935
AGE25227.1
Putative amidase; COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases.
     
  0.900
AGE25848.1
Amidase; COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases.
     
  0.900
AGE25861.1
Amidase; COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases.
     
  0.900
AGE25968.1
Amidase; COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases.
     
  0.900
pcaF
Beta-ketoadipyl CoA thiolase; COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
  
 0.878
pcaH
COG3485 Protocatechuate 3,4-dioxygenase beta subunit.
 
  
 0.874
pcaG
COG3485 Protocatechuate 3,4-dioxygenase beta subunit.
 
  
 0.873
pcaD
Putative aromatic-hydrocarbons degradation-related hydrolase; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
 
  
 0.721
Your Current Organism:
Pseudomonas poae
NCBI taxonomy Id: 1282356
Other names: P. poae RE*1-1-14, Pseudomonas poae RE*1-1-14
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